| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1646 |
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| Symbol | |
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| ID | 6145161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 1633448 |
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| End bp | 1634329 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641616522 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001743700 |
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| Protein GI | 170682090 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTGA CCCAACTGGA GATGTTCAAC GCGGTTGCCG AAGCTGGCAG CATTACCCAG
GCTGCAGCAA AAGTGCATCG CGTGCCGTCG AATCTCACTA CCCGTCTACG CCAGCTGGAA
ACAGAACTGG GGATTGATCT GTTTATTCGC GAGAATCAGC GTTTACGTCT CTCACCTGCC
GGGCATAACT TTTTACGCTA TAGCCAACAA ATTCTCGCGT TAGTGGATGA AGCGCGGAGC
GTTGTCGCTG GCGATGAGCC GCAAGGTTTA TTTTCTCTTG GTTCGCTGGA AAGCACCGCT
GCGGTGCGCA TTCCGGTCAC GCTGGCGGAA TTTAACCGTC GTTATCCCAA AATTCAGTTT
TCACTTTCCA CCGGCCCTTC CGGCACTATG CTGGAAGGGG TGCTGGAGGG AAAACTGAAT
GCAGCGTTTA TTGATGGGCC CATTAACCAT ACTGCCATTG ACGGGATACC GGTGTACCGC
GAGGAGCTGA TGATCGTCAC GCCACAAGGA CATGCGCCAG TAACCCGCGC CAGTCAGGTA
AATGGCAGTA ACATTTATGC CTTCCGCGCC AATTGTTCGT ATCGTCGCCA CTTCGAGAGC
TGGTTTCATG CTGATGGTGC CGCTCCGGGA ACTATTCACG AGATGGAGTC GTATCACGGG
ATGTTGGCCT GTGTGGTCGC AGGAGCAGGT ATTGCGCTTA TTCCGCGCTC TATGCTGGAA
AGTATGCCGG GGCATCACCA GGTTGAAGCG TGGCCGTTAG CTGAGCAATG GCGTTGGTTA
ACAACCTGGC TGGTCTGGCG TCGCGGTGCG AAAACGCGTC CGCTCGAGGC ATTTATTCAA
CTGCTGGATG TGCCTGACTC GGCAAAACAG GGTTACCAAT GA
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| Protein sequence | MDLTQLEMFN AVAEAGSITQ AAAKVHRVPS NLTTRLRQLE TELGIDLFIR ENQRLRLSPA
GHNFLRYSQQ ILALVDEARS VVAGDEPQGL FSLGSLESTA AVRIPVTLAE FNRRYPKIQF
SLSTGPSGTM LEGVLEGKLN AAFIDGPINH TAIDGIPVYR EELMIVTPQG HAPVTRASQV
NGSNIYAFRA NCSYRRHFES WFHADGAAPG TIHEMESYHG MLACVVAGAG IALIPRSMLE
SMPGHHQVEA WPLAEQWRWL TTWLVWRRGA KTRPLEAFIQ LLDVPDSAKQ GYQ
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