Gene EcSMS35_1640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1640 
SymbolmarR 
ID6143534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1629579 
End bp1630013 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content50% 
IMG OID641616516 
ProductDNA-binding transcriptional repressor MarR 
Protein accessionYP_001743694 
Protein GI170683414 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAAGTA CCAGCGATCT GTTCAATGAA ATTATTCCAT TGGGTCGCTT AATCCATATG 
GTTAATCAGA AGAAAGATCG CCTGCTTAAC GAGTATCTGT CTCCGCTGGA TATTACCGCG
GCACAGTTTA AGGTGCTCTG CTCTATCCGC TGCGCGGCGT GTATTACTCC GGTTGAACTG
AAAAAGGTAT TGTCGGTCGA CCTGGGGGCG CTGACCCGTA TGCTGGATCG CCTGGTCTGT
AAAGGCTGGG TGGAAAGGTT GCCGAACCCG AATGACAAGC GCGGCGTACT GGTAAAACTT
ACCACCAGCG GCGCGGCAAT ATGTGAACAA TGCCATCAAT TAGTTGGCCA GGACCTGCAT
CAAGAATTAA CAAAAAACCT GACGGCGGAC GAAGTGGCAA CACTTGAGCA TTTGCTTAAG
AAAGTCCTGC CGTAA
 
Protein sequence
MKSTSDLFNE IIPLGRLIHM VNQKKDRLLN EYLSPLDITA AQFKVLCSIR CAACITPVEL 
KKVLSVDLGA LTRMLDRLVC KGWVERLPNP NDKRGVLVKL TTSGAAICEQ CHQLVGQDLH
QELTKNLTAD EVATLEHLLK KVLP