| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1634 |
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| Symbol | |
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| ID | 6143947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1624014 |
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| End bp | 1625336 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641616510 |
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| Product | PTS system lactose/cellobiose family IIC subunit |
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| Protein accession | YP_001743688 |
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| Protein GI | 170680463 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1455] Phosphotransferase system cellobiose-specific component IIC |
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| TIGRFAM ID | [TIGR00359] phosphotransferase system, cellobiose specific, IIC component
[TIGR00410] PTS system, lactose/cellobiose family IIC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGATTAA TGGCCTCATT CGAACGTGGA ATGGAACGTT TTCTTGTTCC AGTTGCTATC
AAGTTAAACT CACAAAAACA TGTTGCAGCG GTGAGAGATG GATTCGTTTT TACGTTTCCA
ATTATCATGG CAAGCTCATT AATTATATTA ATTAACTTTG CCATATTATC GCCCGACGGC
TTTATTGCCG GGCTGCTGCA TCTGAACAGC GTTTTCCCCA ACCTTGAAAA AGCACAAGCT
ATTTTTACTC CGGTAATGAA TGGTTCTGTA AATATCATGT CAATTATGAT TGCTTTCCTG
GTCGCCAGGA ATATGGCGAT TAGCTATGAG CAAGATGATC TTTTATGCGG ATTAACGGCA
ATAGGAGCAT TTTTTATTGT ATATACGCCA TATCAGATGA TAGATGGGCA AGCATTCCTG
ACGACCAAAT ATCTCGGCGC GCAGGGGTTA TTTGTTGCTG TTATCGTTGC ACTGATCACC
AGTGAAATAT TTTGTCGCTT AGCTCGAAAC CCCAAAATCA CCATCACGAT GCCGGCAGCT
GTACCTCCTG CGGTAGCGCG TTCATTTAAA GTTTTATTGC CAATATTTTT TGTCATGGTG
TTCTTTTCCG CACTTAATTA TTGCCTGACA CTGATATCCC CGGCAGGATT AAACGACCTC
ATTTACACAT TAATCCAGAC GCCGCTCAAA CATATGGGAA CGAATATCTT TGCGGTAATT
ATCCTGGGGG CTGTGGGTAA TTTCCTGTGG GTGCTGGGGA TCCACGGACC TAATACCACC
TCGGCAATTC GAGAAACTGT TTTTTCTGAG GCTAATCTGG AGAATCTCTC CTGGGCCGCT
CAACACGGCA CTACCTGGGG CGCGCCATAT CCGATTACCT GGACTTCTAT TAATGATGCA
TTCGCCAACT GCGGCGGTTC AGGTATGACG TTGGGGTTAT TGTTGGCTAT TTTTATCGCT
TCTAAGCGTG CGGAATACCG TGATCTGGCA AAAATGTCAT TTATCCCCGG TATTTTCAAT
ATCAATGAAC CGATAATGTT CGGCCTTCCT ATTGTACTTA ACCCCATCAT GATGGTGCCG
TTTATTATGG TTCCTATTGT TAACTGTGCC ATTGGTTACT TCTTTGTTTC GATGGAAATT
ATTCCACCGG TTGCTTATGC CGTGCCCTGG ACTACGCCCG GACCTTTAAT TGCTTTCCTC
GGAACCGGGG GAAACTGGCT GGCGTTACTG GTGGGTTTTT TATGTTTAGG TGTGGCGACA
ATGATCTATT TACCTTTTGT TATTGCCGCC AACAAGGTCA ATAACTTAAC AACTAACGGA
TAA
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| Protein sequence | MGLMASFERG MERFLVPVAI KLNSQKHVAA VRDGFVFTFP IIMASSLIIL INFAILSPDG
FIAGLLHLNS VFPNLEKAQA IFTPVMNGSV NIMSIMIAFL VARNMAISYE QDDLLCGLTA
IGAFFIVYTP YQMIDGQAFL TTKYLGAQGL FVAVIVALIT SEIFCRLARN PKITITMPAA
VPPAVARSFK VLLPIFFVMV FFSALNYCLT LISPAGLNDL IYTLIQTPLK HMGTNIFAVI
ILGAVGNFLW VLGIHGPNTT SAIRETVFSE ANLENLSWAA QHGTTWGAPY PITWTSINDA
FANCGGSGMT LGLLLAIFIA SKRAEYRDLA KMSFIPGIFN INEPIMFGLP IVLNPIMMVP
FIMVPIVNCA IGYFFVSMEI IPPVAYAVPW TTPGPLIAFL GTGGNWLALL VGFLCLGVAT
MIYLPFVIAA NKVNNLTTNG
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