| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1630 |
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| Symbol | ydeE |
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| ID | 6146188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 1620366 |
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| End bp | 1621553 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641616506 |
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| Product | putative MFS-type transporter YdeE |
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| Protein accession | YP_001743684 |
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| Protein GI | 170682596 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0579751 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTTAT CCCTACGACG CTCTACCAGC GCCCTTCTTG CCTCGTCGTT GTTATTAACC
ATCGGACGCG GCGCTACGCT GCCGTTTATG ACCATTTACT TGAGTCGCCA GTACAGCCTG
AGTGTCGATC TAATCGGTTA TGCGATGACA ATTGCGCTCA CTATTGGCGT CGTTTTTAGC
CTCGGTTTTG GTATCCTGGC GGATAAGTTC GACAAGAAAC GCTATATGTT ACTGGCAATT
ACCGCCTTCG CCAGCGGTTT TATTGCCATT CCTTTAGTGA ATAACGTGAC GCTGGTGGTG
CTCTTTTTTG CCCTTATTAA CTGCGCCTAT TCCGTTTTTG CTACCGTGTT GAAAGCCTGG
TTTGCCGACA ATCTTTCGTC CACCAGCAAA ACGAAAATCT TCTCAATCAA CTACACCATG
CTCAACATTG GCTGGACCAT CGGTCCGCCG CTCGGCACGT TGTTGGTGAT GCAGAGCATC
AATCTGCCCT TTTGGCTGGC AGCTATCTGT TCCGCGTTTC CCATGCTTTT CATTCAAATT
TGGGTAAAGC GCAGCGAGAA AATCATCGCC ACGGAAACAG GCAGAGCCTG GTCGCCGAAA
GTTTTATTAC AAGATAAAGC ACTGTTGTGG TTTACCTGCT CTGGTTTTCT GGCTTCCTTT
GTTAGCGGCG CATTTGCCTC GTGCATTTCA CAATATGTGA TGGTGATTGC TGATGGGGAT
TTTGCCGAAA AGGTGGTCGC GGTTGTTCTT CCGGTGAATG CTGCCATGGT AGTTACGTTG
CAATATTCCG TGGGCCGCCG CCTTAACCCG GCTAACATCC GCGCGCTGAT GACAGCAGGC
ACCCTCTGTT TCGTCATCGG GCTGGTCGGT TTTATTTTTT CCGGCAACAG CCTGCTAATG
TGGGGTATGT CAGCTGCGGT ATTTACTGTC GGTGAAATCA TTTATGCGCC GGGCGAGTAT
ATGTTGATTG ACCATATTGC GCCGCCAGGA ATGAAAGCCA GCTATTTTTC CGCCCAGTCT
TTAGGCTGGC TTGGTGCTGC GATTAACCCA TTAGTGAGTG GCATAGTACT TACCAGTCTG
CCGCCTTTCT CGCTGTTTAT CATCTTAGCG TTGGTGATCG TTGCTGCGTG GGTGCTGATG
TTAAAAGGAA TTCGTGCAAG ACCGTGGGGG CAGCCCGCGC TTTGTTGA
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| Protein sequence | MNLSLRRSTS ALLASSLLLT IGRGATLPFM TIYLSRQYSL SVDLIGYAMT IALTIGVVFS
LGFGILADKF DKKRYMLLAI TAFASGFIAI PLVNNVTLVV LFFALINCAY SVFATVLKAW
FADNLSSTSK TKIFSINYTM LNIGWTIGPP LGTLLVMQSI NLPFWLAAIC SAFPMLFIQI
WVKRSEKIIA TETGRAWSPK VLLQDKALLW FTCSGFLASF VSGAFASCIS QYVMVIADGD
FAEKVVAVVL PVNAAMVVTL QYSVGRRLNP ANIRALMTAG TLCFVIGLVG FIFSGNSLLM
WGMSAAVFTV GEIIYAPGEY MLIDHIAPPG MKASYFSAQS LGWLGAAINP LVSGIVLTSL
PPFSLFIILA LVIVAAWVLM LKGIRARPWG QPALC
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