| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1629 |
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| Symbol | |
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| ID | 6146024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1619035 |
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| End bp | 1619925 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641616505 |
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| Product | hypothetical protein |
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| Protein accession | YP_001743683 |
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| Protein GI | 170681992 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00134354 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 72 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAAGA AGACAACGGA AATTGATGCC ATCTTGTTAA ATCTCAATAA GGCTATCGAT
GCCCACTACC AGTGGCTGGT AAGTATGTTT CACAGCGTGG TCGCGAGAGA TGCCAGTAAG
CCAGAAATAA CGGATAACCA TTCTTATGGA CTGTGCCAGT TTGGTCGGTG GATTGATCAT
CTGGGGCCAC TCGATAACGA TGAATTACCT TACGTTCGGC TAATGGATTC TGCCCATCAA
CATATGCATA ACTGTGGTCG GGAATTAATG TTGGCTATTG TTGAAAATCA CTGGCAGGAC
GCGCATTTCG ACGCTTTTCA GGAAGGGTTG CTTTCTTTTA CTGCGGCATT AACCGATTAC
AAAATTTATT TACTGACGAT CCGTAGCAAT ATGGATGTTT TGACGGGATT GCCGGGTCGT
CGGGTTCTTG ATGAATCCTT CGATCATCAG TTACGCAACG CTGAGCCTCT GAATCTTTAT
TTAATGTTGT TGGATATTGA CCGATTTAAA TTGGTTAATG ATACCTACGG GCATTTAATC
GGCGATGTAG TATTACGCAC CCTGGCAACT TACTTAGCCA GTTGGACGCG TGATTACGAA
ACGGTTTATC GCTACGGGGG CGAAGAATTT ATCATTATTG TCAAAGCGGA TAATGATGAA
GAAGCATGTC GTGCAGGTAT CAGAATTTGC CAGTTAGTCG ATAACCATGC CATCACACAT
TCTGAAGGGC ATATCAACAT TACCGTGACA GCAGGTGTGA GTCGCGCATT TCCTGAAGAG
CCTCTGGATG TGGTCATTGG AAGAGCGGAC CGGGCAATGT ATGAGGGTAA GCAAACCGGA
AGAAATCGCT GTATGTTTAT TGACGAACAA AACGTGATTC ACCGAGTTTA A
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| Protein sequence | MIKKTTEIDA ILLNLNKAID AHYQWLVSMF HSVVARDASK PEITDNHSYG LCQFGRWIDH
LGPLDNDELP YVRLMDSAHQ HMHNCGRELM LAIVENHWQD AHFDAFQEGL LSFTAALTDY
KIYLLTIRSN MDVLTGLPGR RVLDESFDHQ LRNAEPLNLY LMLLDIDRFK LVNDTYGHLI
GDVVLRTLAT YLASWTRDYE TVYRYGGEEF IIIVKADNDE EACRAGIRIC QLVDNHAITH
SEGHINITVT AGVSRAFPEE PLDVVIGRAD RAMYEGKQTG RNRCMFIDEQ NVIHRV
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