Gene EcSMS35_1618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1618 
Symbol 
ID6144721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1608155 
End bp1608481 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content52% 
IMG OID641616494 
Producthypothetical protein 
Protein accessionYP_001743672 
Protein GI170683618 
COG category[S] Function unknown 
COG ID[COG1742] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00333014 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAAA CAACGTTACT ATTTTTTGCT ACTGCGCTGT GTGAAATTAT TGGGTGCTTT 
TTGCCCTGGC TGTGGTTGAA GCGAAACGCC AGTATCTGGC TGTTGCTTCC GGCAGGGATT
TCACTGGCGC TGTTTGTCTG GTTGTTAACG TTGCATCCTG CGGCGAGTGG GCGTGTTTAC
GCGGCTTATG GTGGCGTTTA TGTCTGCACG GCGTTGATTT GGCTACGCGT TGTGGATGGC
GTGAAACTGA GTCTTTATGA CTGGACGGGG GCGTTGATTG CGCTTTGCGG CATGTTGATC
ATTGTAGCGG GCTGGGGGCG CACGTAG
 
Protein sequence
MIKTTLLFFA TALCEIIGCF LPWLWLKRNA SIWLLLPAGI SLALFVWLLT LHPAASGRVY 
AAYGGVYVCT ALIWLRVVDG VKLSLYDWTG ALIALCGMLI IVAGWGRT