| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1610 |
|---|
| Symbol | dmsC2 |
|---|
| ID | 6144458 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 1599366 |
|---|
| End bp | 1600220 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641616487 |
|---|
| Product | anaerobic dimethyl sulfoxide reductase, C subunit |
|---|
| Protein accession | YP_001743665 |
|---|
| Protein GI | 170680653 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3302] DMSO reductase anchor subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAATG GATGGCATGA ATGGCCACTG GTTATCTTTA CCGTATTGGG TCAATGCGTA
GTAGGCGCGC TGATTGTTAG CGGAATTGGC TGGTTCGCCG CCAAAAATGA CGCAGACCGT
CAGCGTATTG TCCGTGGCAT GTTTTTCCTC TGGCTGTTGA TGGGCATCGG GTTTATTGCC
TCTGTCATGC ACCTGGGGTC GCCACTGCGG GCGTTTAACT CGCTGAATCG AATCGGAGAT
TCTGGTCTGA GTAACGAGAT TGCTGCCGGT TCCATATTTT TTGCCGTTGG CGGATTATGG
TGGCTGGTGG CAGTCATCGG TAAAATGCCG CAAGCGTTGG GGAAACTCTG GTTACTTGTC
AGCATGGCGC TCGGCGTCAT TTTCGTCTGG ATGATGACCT GCGTGTATCA AATCGACACA
GTGCCAACCT GGCATAACGG TTACACTACG CTGGCTTTCT TCCTGACAGT ATTGTTGAGC
GGTCCAATAC TTGCTGCCGC AATTCTGCGG GCAGCCCGCG TTACATTTAA TACCACACCA
TTTGCCATCA TTAGCGTTCT GGCGCTGATC GCTTGTGCCG GGGTGATTGT GCTGCAAGGT
TTGTCTCTGG CGTCTATTCA CTCATCCGTA CAACAAGCCA GCGCACTGGT ACCAGATTAC
GCCTCCTTAC AGGTCTGGCG TGTGGTATTG TTATGCGCAG GTCTAGGATG CTGGCTTTGT
CCGCTCATTC GTCGCCGTGA ACCTCACGTT GCCGGACTTG TTCTGGGGTT AATCCTCATT
CTTGGCGGTG AAATGATCGG GCGTGTGCTC TTTTATGGCC TGCACATGAC GGTAGGAATG
GCTATTGCAG GTTAA
|
|---|
| Protein sequence | MGNGWHEWPL VIFTVLGQCV VGALIVSGIG WFAAKNDADR QRIVRGMFFL WLLMGIGFIA
SVMHLGSPLR AFNSLNRIGD SGLSNEIAAG SIFFAVGGLW WLVAVIGKMP QALGKLWLLV
SMALGVIFVW MMTCVYQIDT VPTWHNGYTT LAFFLTVLLS GPILAAAILR AARVTFNTTP
FAIISVLALI ACAGVIVLQG LSLASIHSSV QQASALVPDY ASLQVWRVVL LCAGLGCWLC
PLIRRREPHV AGLVLGLILI LGGEMIGRVL FYGLHMTVGM AIAG
|
|---|
| |