| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1592 |
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| Symbol | |
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| ID | 6144188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 1580791 |
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| End bp | 1581513 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641616470 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001743648 |
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| Protein GI | 170683762 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0574635 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTAAAG CCCAACCCTT GCCAATATTA ATTACTGGCG GTGGTCGTCG CATCGGCCTC
GCCCTCGCAT GGCATTTCAT TAATCAAAAG CAACCGGTGA TTATCAGCTA TCGGACGCAC
TATCCCGCCA TTGATGGACT TATTAACGCA GGTGCGCAGT GTATTCAGGC TGATTTTTCG
ACCAACGACG GTGTGATGGC GTTTGCCGAT GAAGTACTAA AAAGCACCCA TGGCCTGCGT
GCTATTTTGC ATAACGCCAG CGCGTGGATG GCAGAAAAAC CAGGTACATC ACTGACCGAC
GTACTGGCTT GCATGATGCA GATCCACGTT AATACCCCAT ACCTACTCAA CCATGCACTG
GAAAGATTAC TGCGTGGGCA CGGACACGCC GCCAGCGATA TCATTCACTT TACCGATTAT
GTGGTGGAGC GCGGTAGCGA CAAACATATT GCCTATGCTG CAAGCAAAGC GGCACTGGAT
AATATGACCC GCTCGTTTGC CCGCAAGCTG GCACCGGAAG TGAAAGTGAA TTCTATTGCG
CCATCGCTAA TCCTGTTTAA TGAACATGAT GATGCCGAAT ATCGACAACA GGCGCTGAAT
AAATCACTGA TGAAAACCGC GCCTGGCGAG AAAGAAGTGA TCGACCTGGT CGATTACTTA
CTTACCAGCT GCTTTGTCAC CGGACGCAGT TTCCCTCTTG ATGGCGGTCG TCATCTGCGT
TAA
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| Protein sequence | MGKAQPLPIL ITGGGRRIGL ALAWHFINQK QPVIISYRTH YPAIDGLINA GAQCIQADFS
TNDGVMAFAD EVLKSTHGLR AILHNASAWM AEKPGTSLTD VLACMMQIHV NTPYLLNHAL
ERLLRGHGHA ASDIIHFTDY VVERGSDKHI AYAASKAALD NMTRSFARKL APEVKVNSIA
PSLILFNEHD DAEYRQQALN KSLMKTAPGE KEVIDLVDYL LTSCFVTGRS FPLDGGRHLR
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