Gene EcSMS35_1588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1588 
Symboltus 
ID6145503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1577301 
End bp1578242 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content50% 
IMG OID641616466 
ProductDNA replication terminus site-binding protein 
Protein accessionYP_001743644 
Protein GI170680500 
COG category 
COG ID 
TIGRFAM ID[TIGR02648] DNA replication terminus site-binding protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0131189 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTTAATA TTATGGCGCG TTACGATCTC GTAGACCGAC TCAACACTAC TTTTCGCCAG 
ATGGAACAAG AGCTGGCTGC ATTTGCCGCT CATCTTGAGC AACACAAGCT ATTGGTTGCC
CGCGTGTTCT CTTTGCCGGA GGTAAAAAAA GAGGATGAGC ATAATCCGCT TAATCGTATT
GAGGTAAAAC AACATCTCGG CAACGACGCG CAGTCGCTGG CGTTGCGTCA TTTCCGCCAT
TTATTTATTC AACAACAGTC CGAAAATCGC AGCAGCAAGG CCGCTGTTCG TCTACCTGGC
GTGTTGTGTT ACCAGGTCGA TAACCTTTCG CAAGCAGCGT TGGTCAGTCA TATTCAGCAC
ATCAATAAAC TCAAGACCAC GTTCGAGCAT ATTGTCACGG TTGAATCAGA ACTCCCCACC
GCGGCACGTT TTGAATGGGT GCATCGTCAT TTGCCGGGGC TGATCACCCT TAATGCCTAC
CGCACGCTCA CTGTTCTGCA CGACCCCGCC ACTTTACGTT TTGGCTGGGC TAATAAACAT
ATCATTAAAA ATTTGCATCG TGATGAAGTC CTGGCACAGC TGGAAAAAAG CCTGAAATCA
CCACGCAGTG TCGCACCGTG GACGCGCGAG GAGTGGCAAA GAAAACTGGA GCGAGAATAT
CAGGATATCG CTGCCCTGCC ACAGAACGCG AAGTTAAAAA TCAAACGTCC GGTGAAAGTG
CAGCCGATTG CCCGCGTCTG GTACAAAGGA GATCAAAAAC AAGTACAACA CGCTTGCCCT
ACGCCGCTGA TTGCACTGAT TAATCGGGAT AATGGCGCGG GCGTGCCGGA CGTTGGTGAG
TTGTTAAATT ACGATGCCGA CAATGTGCAG CACCGTTATA AACCACAGGC GCAGCCGCTT
CGTTTGATCA TTCCACGGCT GCACCTGTAT GTTGCAGATT AA
 
Protein sequence
MVNIMARYDL VDRLNTTFRQ MEQELAAFAA HLEQHKLLVA RVFSLPEVKK EDEHNPLNRI 
EVKQHLGNDA QSLALRHFRH LFIQQQSENR SSKAAVRLPG VLCYQVDNLS QAALVSHIQH
INKLKTTFEH IVTVESELPT AARFEWVHRH LPGLITLNAY RTLTVLHDPA TLRFGWANKH
IIKNLHRDEV LAQLEKSLKS PRSVAPWTRE EWQRKLEREY QDIAALPQNA KLKIKRPVKV
QPIARVWYKG DQKQVQHACP TPLIALINRD NGAGVPDVGE LLNYDADNVQ HRYKPQAQPL
RLIIPRLHLY VAD