| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1587 |
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| Symbol | fumA |
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| ID | 6146518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1574112 |
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| End bp | 1575758 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641616464 |
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| Product | fumarate hydratase |
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| Protein accession | YP_001743642 |
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| Protein GI | 170682150 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.596697 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAACA AACCCTTTCA TTATCAGGCT CCTTTTCCAC TCAAAAAAGA TGATACTGAG
TATTACCTGC TAACCAGCGA ACACGTTAGC GTATCTGAAT TTGAAGGGCA GGAGATTTTG
AAAGTCGCAC CCGAAGCGTT AACTCTGTTG GCGCGTCAAG CGTTTCATGA TGCGTCATTT
ATGCTGCGTC CGGCTCACCA ACAACAGGTG GCCGACATTC TGCGTGACCC GGAAGCCAGC
GAAAATGATA AATATGTGGC GCTGCAATTC CTGCGTAACT CCGACATCGC GGCGAAAGGC
ATTCTGCCGA CCTGTCAGGA TACCGGCACC GCGATTATTG TTGGTAAAAA AGGGCAGCGT
GTATGGACCG GTGGCGGTGA TGAAGCGGCG CTGGCACGCG GTGTCTATAA CACTTATATC
GAAGATAATC TGCGCTACTC GCAAAACGCG CCGCTGGATA TGTATAAAGA GGTGAATACC
GGCACCAATC TACCAGCGCA GATCGATCTT TATGCCGTTG ATGGCGACGA GTACAAATTC
CTCTGTATCG CCAAAGGTGG CGGTTCGGCA AACAAGACGT ATCTGTATCA GGAAACCAAA
GCGTTACTAA CGCCGGGGAA ACTGAAAAAT TACCTGGTTG AGAAGATGCG CACGCTGGGT
ACGGCGGCCT GTCCTCCGTA TCATATTGCG TTCGTTATTG GTGGAACTTC TGCAGAAACG
AACCTTAAAA CGGTGAAACT GGCTTCCGCT AAATACTATG ATGAACTGCC AACGGAAGGG
AATGAGCACG GACAGGCGTT CCGCGATGTG GAACTGGAAA AAGAATTGCT GATCGAAGCG
CAAAATCTTG GTCTGGGTGC GCAGTTTGGT GGTAAATACT TCGCTCACGA CATCCGCGTG
ATTCGCCTGC CACGTCACGG CGCATCCTGC CCGGTCGGTA TGGGCGTCTC CTGTTCTGCT
GACCGTAATA TCAAAGCGAA GATCAACCGT CAGGGGATCT GGATCGAAAA ACTGGAACAT
AATCCAGGAA AATATATCCC GGAAGAGCTG CGCAAAGCGG GAGAAGGCGA AGCGGTGCGC
GTTGACCTTA ACCGTCCGAT GAAAGAGATC CTCGCACAGT TGTCGCAGTA TCCCGTTTCT
ACACGCTTAT CGCTGAATGG CACGATTATC GTCGGTCGTG ATATTGCTCA CGCCAAACTG
AAAGAGCGGA TGGATAACGG TGAAGGGCTG CCGCAGTACA TCAAAGATCA TCCGATTTAC
TATGCGGGTC CGGCCAAAAC GCCGGAAGGT TATGCCTCCG GTTCTCTTGG CCCAACGACC
GCCGGACGGA TGGATTCTTA TGTCGATCAA CTGCAAGCGC AGGGAGGAAG TATGATCATG
CTGGCGAAAG GCAACCGCAG CCAGCAGGTG ACGGATGCCT GTAAAAAACA CGGCGGTTTC
TACCTTGGCA GTATCGGTGG TCCGGCCGCT GTATTGGCGC AGGGTAGTAT TAAGAGCCTG
GAATGTGTTG AATATCCGGA ACTGGGAATG GAAGCCATCT GGAAAATTGA AGTGGAAGAT
TTCCCGGCAT TTATCCTTGT GGATGATAAA GGAAATGACT TCTTCCAGCA GATACAACTC
ACACAGTGCA CCCGCTGTGT GAAATAA
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| Protein sequence | MSNKPFHYQA PFPLKKDDTE YYLLTSEHVS VSEFEGQEIL KVAPEALTLL ARQAFHDASF
MLRPAHQQQV ADILRDPEAS ENDKYVALQF LRNSDIAAKG ILPTCQDTGT AIIVGKKGQR
VWTGGGDEAA LARGVYNTYI EDNLRYSQNA PLDMYKEVNT GTNLPAQIDL YAVDGDEYKF
LCIAKGGGSA NKTYLYQETK ALLTPGKLKN YLVEKMRTLG TAACPPYHIA FVIGGTSAET
NLKTVKLASA KYYDELPTEG NEHGQAFRDV ELEKELLIEA QNLGLGAQFG GKYFAHDIRV
IRLPRHGASC PVGMGVSCSA DRNIKAKINR QGIWIEKLEH NPGKYIPEEL RKAGEGEAVR
VDLNRPMKEI LAQLSQYPVS TRLSLNGTII VGRDIAHAKL KERMDNGEGL PQYIKDHPIY
YAGPAKTPEG YASGSLGPTT AGRMDSYVDQ LQAQGGSMIM LAKGNRSQQV TDACKKHGGF
YLGSIGGPAA VLAQGSIKSL ECVEYPELGM EAIWKIEVED FPAFILVDDK GNDFFQQIQL
TQCTRCVK
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