Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_1583 |
Symbol | uidB |
ID | 6143046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 1568407 |
End bp | 1569780 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641616460 |
Product | glucuronide transporter |
Protein accession | YP_001743638 |
Protein GI | 170683190 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2211] Na+/melibiose symporter and related transporters |
TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCAAC AACTCTCCTG GCGCACCATC GTCGGCTACA GCCTCGGTGA CGTCGCCAAT AACTTCGCCT TCGCAATGGG GGCGCTCTTC CTGTTGAGTT ACTACACCGA CGTCGCTGGC GTCGGTGCCG CTGCGGCGGG CACCATGCTG TTACTGGTGC GGGTATTCGA TGCCTTCGCC GATGTCTTTG CCGGACGAGT GGTGGACAGT GTGAATACCC GTTGGGGAAA ATTCCGCCCG TTTTTACTCT TCGGTACTGC GCCGTTAATG ATCTTCAGCG TGCTGGTATT CTGGGTACCG ACCGACTGGA GCCATAGCAG CAAAGTTGTG TATGCATATT TGACCTACAT GGGACTCGGG CTTTGCTACA GCCTGGTGAA TATTCCTTAT GGTTCACTTG CTACCGCGAT GACCCAACAA CCACAATCCC GCGCCCGTCT GGGCGCGGCT CGCGGGATTG CCGCGTCATT GACCTTTGTC TGCCTGGCAT TTCTGATAGG ACCGAGCATT AAGAACTCCA GCCCGGAAGA GATGGTGTCG GTATACCATT TCTGGACGAT TGTGCTGGCG ATTGCCGGAA TGGTGCTTTA CTTCATCTGC TTCAAATCGA CGCGTGAGAA TGTGGTACGT ATCGTGGCGC AGCCGTCATT GAAGATCAGT CTGCAAACCC TGAAACGGAA TCGCCCGCTG TTTATGTTGT GCATCGGTGC GCTGTGTGTG CTGATTTCGA CCTTCGCGGT CAGCGCCTCG TCGTTGTTCT ACGTGCGCTA TGTGTTAAAT GATACCGGGC TGTTCACTGT GCTGGTACTG GTGCAAAACC TGGTCGGTAC TGTGGCATCG GCACCGCTGG TGCCTGGGAT GGTCGCGAGG ATCGGTAAAA AGAATACCTT CCTGATTGGC GCTTTGCTGG GAACCTGCGG TTATCTGCTG TTCTTCTGGG TTTCCGTCTG GTCACTGCCG GTGGCGTTGG TTGCGTTGGC CATCGCATCA ATTGGCCAGG GCGTTACCAT GACCGTGATG TGGGCACTGG AAGCTGATAC CGTAGAATAC GGTGAATACC TGACCGGCGT GCGAATTGAA GGGCTCACCT ATTCACTATT CTCATTTACC CGTAAATGCG GTCAGGCAAT CGGAGGTTCA ATTCCTGCCT TTATTTTGGG ATTAAGCGGA TATATCGCCA ATCAGGCGCA AACGACGGAA GTTATTATGG GCATCCGCAC ATCAATTGCC TTAGTACCTT GCGGATTTAT GCTGCTGGCA TTCGTCATTA TCTGGTTTTA TCCGCTCACG GATAAAAAAT TCAAAGAAAT CGTGGTTGAA ATTGATAATC GTAAAAAAAT GCAGCAGCAA TTAATCAGCG ATATCATTAA TTAA
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Protein sequence | MNQQLSWRTI VGYSLGDVAN NFAFAMGALF LLSYYTDVAG VGAAAAGTML LLVRVFDAFA DVFAGRVVDS VNTRWGKFRP FLLFGTAPLM IFSVLVFWVP TDWSHSSKVV YAYLTYMGLG LCYSLVNIPY GSLATAMTQQ PQSRARLGAA RGIAASLTFV CLAFLIGPSI KNSSPEEMVS VYHFWTIVLA IAGMVLYFIC FKSTRENVVR IVAQPSLKIS LQTLKRNRPL FMLCIGALCV LISTFAVSAS SLFYVRYVLN DTGLFTVLVL VQNLVGTVAS APLVPGMVAR IGKKNTFLIG ALLGTCGYLL FFWVSVWSLP VALVALAIAS IGQGVTMTVM WALEADTVEY GEYLTGVRIE GLTYSLFSFT RKCGQAIGGS IPAFILGLSG YIANQAQTTE VIMGIRTSIA LVPCGFMLLA FVIIWFYPLT DKKFKEIVVE IDNRKKMQQQ LISDIIN
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