| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1566 |
|---|
| Symbol | nth |
|---|
| ID | 6146309 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 1550696 |
|---|
| End bp | 1551331 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641616443 |
|---|
| Product | endonuclease III |
|---|
| Protein accession | YP_001743621 |
|---|
| Protein GI | 170681381 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0177] Predicted EndoIII-related endonuclease |
|---|
| TIGRFAM ID | [TIGR01083] endonuclease III |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.263059 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 65 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAAG CAAAACGCCT GGAGATCCTC ACTCGCCTGC GTGAGAACAA TCCTCATCCC
ACCACCGAGC TTAATTTCAG TTCGCCTTTT GAATTGCTGA TTGCCGTACT GCTTTCCGCT
CAGGCGACCG ATGTCAGTGT TAATAAGGCG ACGGCGAAAC TCTACCCGGT GGCTAATACA
CCTGCAGCGA TGCTTGAACT GGGCGTCGAA GGGGTGAAAA CCTATATCAA AACCATTGGG
CTTTATAACA GCAAAGCAGA AAATATCATC AAAACCTGCC GTATCTTACT GGAACAGCAT
AATGGCGAGG TTCCGGAAGA TCGTGCTGCG CTTGAAGCCC TGCCTGGTGT AGGTCGTAAA
ACAGCCAACG TCGTATTAAA CACTGCATTC GGCTGGCCGA CTATTGCTGT CGACACGCAC
ATTTTCCGCG TTTGTAATCG TACTCAATTT GCGCCGGGGA AAAACGTCGA ACAGGTAGAA
GAAAAGCTAC TGAAAGTGGT TCCGGCAGAG TTTAAAGTCG ACTGCCACCA TTGGTTGATC
CTCCACGGGC GATATACCTG CATTGCCCGC AAGCCCCGCT GTGGCTCTTG TATTATTGAA
GATCTTTGTG AATACAAAGA GAAAGTTGAC ATCTGA
|
|---|
| Protein sequence | MNKAKRLEIL TRLRENNPHP TTELNFSSPF ELLIAVLLSA QATDVSVNKA TAKLYPVANT
PAAMLELGVE GVKTYIKTIG LYNSKAENII KTCRILLEQH NGEVPEDRAA LEALPGVGRK
TANVVLNTAF GWPTIAVDTH IFRVCNRTQF APGKNVEQVE EKLLKVVPAE FKVDCHHWLI
LHGRYTCIAR KPRCGSCIIE DLCEYKEKVD I
|
|---|
| |