| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1565 |
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| Symbol | tppB |
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| ID | 6146773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 1548584 |
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| End bp | 1550086 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641616442 |
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| Product | putative tripeptide transporter permease |
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| Protein accession | YP_001743620 |
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| Protein GI | 170682111 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3104] Dipeptide/tripeptide permease |
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| TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCACTG CAAACCAAAA ACCAACTGAA AGCGTCAGTT TGAACGCTTT CAAACAACCG
AAGGCGTTCT ATCTCATCTT CTCGATTGAG TTATGGGAAC GTTTTGGTTA TTACGGCCTA
CAAGGAATTA TGGCTGTTTA CCTGGTTAAA CAACTGGGTA TGTCTGAAGC GGATTCAATC
ACCCTTTTCT CTTCCTTTAG TGCCCTGGTT TATGGTCTGG TCGCTATCGG CGGCTGGTTA
GGTGACAAGG TACTGGGTAC TAAACGCGTA ATTATGCTTG GCGCTATTGT GCTGGCGATT
GGTTATGCTC TGGTTGCCTG GTCTGGTCAC GACGCCGGTA TCGTTTATAT GGGTATGGCG
GCTATTGCGG TCGGTAACGG CCTGTTTAAA GCTAACCCGT CTTCTCTGCT TTCTACATGC
TATGAGAAAA ACGACCCGCG TCTGGACGGT GCATTCACCA TGTACTACAT GTCCGTCAAC
ATCGGCTCTT TCTTCTCTAT GATCGCCACC CCGTGGCTGG CCGCGAAATA CGGCTGGAGT
GTTGCGTTTG CGTTGAGCGT TGTAGGCCTG CTGATCACTA TCGTTAACTT CGCCTTCTGC
CAACGCTGGG TTAAACAGTA CGGTTCAAAA CCAGACTTCG AGCCTATCAA CTACCGTAAC
CTGCTGCTGA CCATTATTGG TGTTGTGGCA CTGATCGCTA TCGCCACCTG GCTGCTGCAC
AATCAGGAAG TTGCGCGTAT GGCGCTGGGC GTTGTTGCCT TCGGTATTGT GGTTATCTTC
GGTAAAGAAG CCTTCGCGAT GAAAGGTGCT GCGCGTCGTA AAATGATCGT TGCCTTCATC
CTGATGCTCG AAGCCATTAT CTTCTTCGTG CTGTACAGCC AGATGCCAAC GTCACTGAAC
TTCTTTGCGA TTCGTAACGT TGAGCACTCC ATTCTGGGTC TGGCCGTAGA ACCTGAGCAG
TATCAGGCAC TGAACCCGTT CTGGATCATC ATCGGTAGTC CGATTCTGGC CGCTATCTAT
AACAAGATGG GCGATACCCT GCCGATGCCA ACCAAGTTTG CAATCGGCAT GGTGATGTGT
TCTGGTGCGT TCCTGATTCT GCCGCTGGGT GCGAAATTCG CGTCTGACGC TGGTATCGTG
TCTGTAAGCT GGCTGGTCGC GAGCTATGGC CTGCAGAGTA TCGGGGAACT GATGATCTCT
GGTCTGGGTC TGGCAATGGT CGCACAACTC GTTCCGCAGC GTCTGATGGG CTTCATTATG
GGTAGCTGGT TCCTGACCAC TGCCGGTGCA AACCTGATTG GTGGTTATGT TGCGGGTATG
ATGGCTGTGC CGGATAACGT TACCGATCCG CTGATGTCAC TGGAAGTCTA TGGTCGCGTA
TTCTTGCAGA TTGGTGTCGC TACTGCCGTT ATTGCAGTAC TGATGCTGCT GACCGCGCCG
AAACTGCACC GCATGACGCA GGATGACGCT GCAGACAAAG CGGCGAAAGC TGCTGTAGCG
TAA
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| Protein sequence | MSTANQKPTE SVSLNAFKQP KAFYLIFSIE LWERFGYYGL QGIMAVYLVK QLGMSEADSI
TLFSSFSALV YGLVAIGGWL GDKVLGTKRV IMLGAIVLAI GYALVAWSGH DAGIVYMGMA
AIAVGNGLFK ANPSSLLSTC YEKNDPRLDG AFTMYYMSVN IGSFFSMIAT PWLAAKYGWS
VAFALSVVGL LITIVNFAFC QRWVKQYGSK PDFEPINYRN LLLTIIGVVA LIAIATWLLH
NQEVARMALG VVAFGIVVIF GKEAFAMKGA ARRKMIVAFI LMLEAIIFFV LYSQMPTSLN
FFAIRNVEHS ILGLAVEPEQ YQALNPFWII IGSPILAAIY NKMGDTLPMP TKFAIGMVMC
SGAFLILPLG AKFASDAGIV SVSWLVASYG LQSIGELMIS GLGLAMVAQL VPQRLMGFIM
GSWFLTTAGA NLIGGYVAGM MAVPDNVTDP LMSLEVYGRV FLQIGVATAV IAVLMLLTAP
KLHRMTQDDA ADKAAKAAVA
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