Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_1563 |
Symbol | pdxY |
ID | 6143214 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 1546970 |
End bp | 1547830 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641616440 |
Product | pyridoxamine kinase |
Protein accession | YP_001743618 |
Protein GI | 170683400 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2240] Pyridoxal/pyridoxine/pyridoxamine kinase |
TIGRFAM ID | [TIGR00687] pyridoxal kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAATA TTCTCGCTAT CCAGTCTCAC GTTGTTTATG GTCATGCGGG TAACAGTGCG GCAGAGTTTC CGATGCGCCG CCTGGGCGCG AACGTCTGGC CGCTGAACAC CGTTCAATTT TCTAATCACA CCCAATACGG CAAATGGACC GGCTGCGTGA TGCCGCCCAG CCATTTAACC GAAATAGTGC AAGGCATTGC CGCCATTGAT AAATTACACA CCTGTGATGC CGTATTAAGT GGCTATCTGG GATCGGCGGA GCAGGGTGAA CATATCCTCG GTATCGTCCG TCAGGTGAAA GCCGCGAATC CGCAGGCGAA ATATTTTTGC GATCCGGTAA TGGGTCATCC GGAAAAAGGC TGTATCGTTG CACCGGGTGT CGCAGAGTTT CATGTGCGTC ACGGTTTGCC TGCCAGCGAT ATCATTGCGC CGAATCTGGT TGAGCTGGAG ATACTCTGTG AGCATCCGGT AAATAACGTC GAAGAAGCGG TTCTGGCAGC GCGTGAACTC ATTGCGCAAG GGCCACAAAT TGTGTTGGTT AAACACCTGG CGCGGGCTGG CTACAGCCGT GACCGTTTTG AAATGCTGCT GGTTACCGCC GATGAAGCCT GGCATATCAG CCGTCCGCTG GTGGATTTTG GTATGCGCCA GCCGGTAGGT GTTGGTGATG TGACGAGCGG TTTACTGCTG GTGAAACTGC TTCAGGGGGC AACGCTGCAG GAGGCCCTGG AACATGTGAC CGCTGCAGTA TACGAAATCA TGGTGACCAC CAAAGCAATG CAGGAATATG AGTTGCAAGT GGTTGCTGCT CAGGATCGTA TTGCCAAACC AGAACATTAT TTCAGCGCAA CAAAGCTCTG A
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Protein sequence | MKNILAIQSH VVYGHAGNSA AEFPMRRLGA NVWPLNTVQF SNHTQYGKWT GCVMPPSHLT EIVQGIAAID KLHTCDAVLS GYLGSAEQGE HILGIVRQVK AANPQAKYFC DPVMGHPEKG CIVAPGVAEF HVRHGLPASD IIAPNLVELE ILCEHPVNNV EEAVLAAREL IAQGPQIVLV KHLARAGYSR DRFEMLLVTA DEAWHISRPL VDFGMRQPVG VGDVTSGLLL VKLLQGATLQ EALEHVTAAV YEIMVTTKAM QEYELQVVAA QDRIAKPEHY FSATKL
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