Gene EcSMS35_1560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1560 
Symbol 
ID6144944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1544461 
End bp1544790 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content46% 
IMG OID641616437 
Productlysozyme inhibitor 
Protein accessionYP_001743615 
Protein GI170680469 
COG category[R] General function prediction only 
COG ID[COG3895] Predicted periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTATGA AAAAACTGTT ACTGATCTGT TTGCCGGTCC TTCTCACCGG CTGTAGCGTG 
TTCAATCAAC TGGTTGAGCG CATGCAAACC GATACGCTGG AATACCAGTG TGATGAAAAA
CCGTTGACGG TCAAACTGAA TAATCCGCGC CAGGAAGTCA GTTTTGTTTA TGATAATCAA
CTATTGCATC TCAAACAGGG CATTTCTGCG TCTGGTGCAC GTTACACCGA CGGGATCTAT
GTTTTCTGGT CGAAAGGCGA GGAAGCGACT GTCTATAAAC GCGACCGCAT CGTCTTGAAT
AACTGTCAGT TACAAAATCC ACAGCGTTGA
 
Protein sequence
MSMKKLLLIC LPVLLTGCSV FNQLVERMQT DTLEYQCDEK PLTVKLNNPR QEVSFVYDNQ 
LLHLKQGISA SGARYTDGIY VFWSKGEEAT VYKRDRIVLN NCQLQNPQR