| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1557 |
|---|
| Symbol | |
|---|
| ID | 6144280 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 1542032 |
|---|
| End bp | 1542466 |
|---|
| Gene Length | 435 bp |
|---|
| Protein Length | 144 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641616434 |
|---|
| Product | transcriptional regulator SlyA |
|---|
| Protein accession | YP_001743612 |
|---|
| Protein GI | 170683212 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.991489 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 63 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGAATCGC CACTAGGTTC TGATCTGGCA CGGTTGGTGC GCATATGGCG TGCTCTGATA
GACCATCGCC TGAAACCGCT GGAGTTAACA CAAACCCATT GGGTTACGTT ACACAATATC
CATCAGTTAC CTCCAGACCA GTCGCAAATT CAACTGGCAA AAGCGATTGG CATCGAGCAG
CCATCACTGG TCCGTACTCT GGACCAACTG GAAGAAAAAG GGTTAATTTC GCGTCAAACT
TGTGCCAGCG ATCGTCGGGC TAAACGTATT AAACTGACGG AAAAGGCAGA GCCACTGATC
AGCGAAATGG AAGCTGTTAT TAACAAAACC CGCGCGGAAA TTTTACATGG CATCTCCGCA
GAGGAACTGG AACAACTGAT TAAGCTCATC GCAAAACTTG AGCATAATAT CATTGAGTTA
CAGGCCAAAG GGTGA
|
|---|
| Protein sequence | MESPLGSDLA RLVRIWRALI DHRLKPLELT QTHWVTLHNI HQLPPDQSQI QLAKAIGIEQ
PSLVRTLDQL EEKGLISRQT CASDRRAKRI KLTEKAEPLI SEMEAVINKT RAEILHGISA
EELEQLIKLI AKLEHNIIEL QAKG
|
|---|
| |