| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1553 |
|---|
| Symbol | |
|---|
| ID | 6146271 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 1538723 |
|---|
| End bp | 1540735 |
|---|
| Gene Length | 2013 bp |
|---|
| Protein Length | 670 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641616430 |
|---|
| Product | fusaric acid resistance domain-containing protein |
|---|
| Protein accession | YP_001743608 |
|---|
| Protein GI | 170682942 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1289] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.266646 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCAT CGTCATGGTC CTTGCGCAAT TTGCCCTGGT TCAGGGCCAC GCTGGCGCAA
TGGCGTTATG CGTTACGCAA TACCATTGCC ATGTGTCTGG CGCTGACGGT TGCCTATTAT
TTAAATCTGG ATGAACCCTA TTGGGCGATG ACCTCGGCTG CCGTGGTTAG CTTTCCCACC
GTGGGCGGTG TCATCAGCAA AAGCCTCGGA CGCATCGCTG GCAGTTTGCT CGGAGCCATT
GCGGCACTGC TTCTTGCCGG ACATACACTT AATGAGCCGT GGTTTTTTCT TTTGAGCATG
GCGGCGTGGC TTGGCTTTTG TACCTGGGCC TGTGCGCACT TCACGAATAA TGTCGCGTAT
GCATTTCAAC TGGCGGGCTA CACGGCTGCC ATCATCGCCT TTCCGATGGT TAATATTACT
GAGGCCAGCC AGCTGTGGGA TATCGCTCAG GCGCGCGTTT GCGAGGTGAT TGTCGGTATT
TTGTGCGGCG GCATGATGAT GATGATCCTG CCGAGCAATT CCGATGCTAC AGCCCTTTTA
ACCGCATTGA AAAACATGCA CGCCCGATTG CTGGAACATG CCAGTTTACT CTGGCAGCCT
GAAACAACCG ATGCCATTCG TGCAGCACAT GAAGGGGTGA TTGGGCAGAT ACTGACCATG
AATTTGCTCC GTATCCAGGC TTTCTGGAGC CACTATCGTT TTCGCCAGCA AAACGCACGC
CTTAATGCGC TGCTCCACCA GCAATTACGT ATGACCAGTG TCATCTCCAG CCTGCGACGT
ATGTTGCTCA ACTGGCCCTC ACCGCCAGGT GCCACACGAG AAATTCTCGA ACAGCTGCTG
ACGGCGCTCG CCAGTTCGCA AACAGATGTT TACACCGTCG CACGTATTAT CGCCCCGCTA
CGCCCGACCA ACGTCGCCGA CTATCGGCAC GTCGCCTTCT GGCAGCGACT ACGTTATTTT
TGCCGACTTT ATCTGCAAAG TAGTCAGGAA TTACATCGTC TGCAAAGCGG TGTAGATGAT
CATACCAGAC TCCCACGGAC ATCCGGCCTG GCTCGTCATA CCGATAACGC CGAAGCTATG
TGGAGCGGGC TGCGTACATT TTGTACGTTG ATGATGATTG GCACATGGAG TATTGCTTCG
CAATGGGATG CCGGTGCCAA TGCATTAACG CTGGCAGCGA TTAGCTGCGT ACTCTACTCC
GCCGTCGCAG CTCCGTTTAA GTCGTTGTCA CTGCTGATGC GTACGCTGGT GTTACTTTCG
CTATTCAGCT TTGTGGTCAA ATTTGGCCTG ATGGTCCAGA TTAGCGATCT GTGGCAATTT
TTACTGTTTC TCTTTCCACT GCTGGCGACG ATGCAGCTTC TTAAATTGCA GATGCCCAAA
TTTGCCGCAC TGTGGGGGCA ACTGATTGTT TTTATGGGTT CGTTTATCGC TGTCACTAAT
CCCCCGGTGT ATGATTTTGC TGATTTTCTT AACGATAATC TGGCAAAAAT CGTTGGCGTT
GCGCTGGCGT GGTTAGCGTT CGCCATTCTG CGTCCAGGAT CGGATGCTCG TAAAAGTCGC
CGTCATATTC GCGCGCTGCG CCGGGATTTT GTCGATCAAC TAAGCCGCCA TCCATCACTG
AGTGAAAGCG AATTTGAATC GCTCACTTAT CATCACGTCA GTCAGTTGAG TAACAGCCAG
GATGCGATGG CTCGCCGTTG GTTATTACGC TGGGGTGTAG TGCTGCTGAA CTGTTCTCAT
GTTGTCTGGC AATTGCGCGA CTGGGAATCG CGTTCCGATC CGTTATCGCG AGTACGGGAT
AACTGTATTT CACTGTTGCG CGGAGTGATG AGTGAGCGTG GCGTTCAGCA AAAATCACTG
GCGGCCACAC TTGAAGAATT ACAGCGAATT TGCGACAGCC TTGCCCGTCA TCATCAACCT
GCCGCCCGTG AGCTGGCGGC AATTGTCTGG CGGCTGTACT GCTCGCTTTC GCAACTTGAG
CAAGCACCGC CGCAAGGTAC GCTGGCCTCT TAA
|
|---|
| Protein sequence | MNASSWSLRN LPWFRATLAQ WRYALRNTIA MCLALTVAYY LNLDEPYWAM TSAAVVSFPT
VGGVISKSLG RIAGSLLGAI AALLLAGHTL NEPWFFLLSM AAWLGFCTWA CAHFTNNVAY
AFQLAGYTAA IIAFPMVNIT EASQLWDIAQ ARVCEVIVGI LCGGMMMMIL PSNSDATALL
TALKNMHARL LEHASLLWQP ETTDAIRAAH EGVIGQILTM NLLRIQAFWS HYRFRQQNAR
LNALLHQQLR MTSVISSLRR MLLNWPSPPG ATREILEQLL TALASSQTDV YTVARIIAPL
RPTNVADYRH VAFWQRLRYF CRLYLQSSQE LHRLQSGVDD HTRLPRTSGL ARHTDNAEAM
WSGLRTFCTL MMIGTWSIAS QWDAGANALT LAAISCVLYS AVAAPFKSLS LLMRTLVLLS
LFSFVVKFGL MVQISDLWQF LLFLFPLLAT MQLLKLQMPK FAALWGQLIV FMGSFIAVTN
PPVYDFADFL NDNLAKIVGV ALAWLAFAIL RPGSDARKSR RHIRALRRDF VDQLSRHPSL
SESEFESLTY HHVSQLSNSQ DAMARRWLLR WGVVLLNCSH VVWQLRDWES RSDPLSRVRD
NCISLLRGVM SERGVQQKSL AATLEELQRI CDSLARHHQP AARELAAIVW RLYCSLSQLE
QAPPQGTLAS
|
|---|
| |