| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1550 |
|---|
| Symbol | |
|---|
| ID | 6147455 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 1536798 |
|---|
| End bp | 1537175 |
|---|
| Gene Length | 378 bp |
|---|
| Protein Length | 125 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641616427 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001743605 |
|---|
| Protein GI | 170683126 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3313] Predicted Fe-S protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0126376 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGCGA GTATCATGTT CGGTGTGTTT GTTCATGCGT TGGAGTGTAG TAGACCAGTC
GGTCTAGTGC AAGCAAAGTT GCTACTTTGG GCATTAACAG CTTCAATAGT GGTAATAATC
TTATCTGAGG AGGGCGAAGT GGCGGAGCAA TTAGAGTTCT TTCCCGTCCA GAGCCCGTGC
CGGGGAATTT GCCAGTCTGA CGAACGCGGA TTTTGTCGCG GCTGCTTTCG CAGTCGGGAT
GAGCGTTTTA ACTGGAATAA AATGAGCGAT GGCGAAAAAC AAGAGGTACT GCGCCTTTGT
CGGCAGCGAT TAATGCGCAA ATTACGTGCA AATAAGCCGG CGTCATCAGA TGAACCGGAG
CAACCATCAC TCTTTTGA
|
|---|
| Protein sequence | MFASIMFGVF VHALECSRPV GLVQAKLLLW ALTASIVVII LSEEGEVAEQ LEFFPVQSPC
RGICQSDERG FCRGCFRSRD ERFNWNKMSD GEKQEVLRLC RQRLMRKLRA NKPASSDEPE
QPSLF
|
|---|
| |