| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1530 |
|---|
| Symbol | ydhR |
|---|
| ID | 6145932 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 1515853 |
|---|
| End bp | 1516158 |
|---|
| Gene Length | 306 bp |
|---|
| Protein Length | 101 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641616407 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001743587 |
|---|
| Protein GI | 170680041 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000186188 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.000664342 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACTT TGTTACAACT TCATTTTTCT TTCAATGGCC CATTTGGCGA CGCAATGGCT
GAGCAGCTTA AACCTCTTGC TGAGTCGATT AATCAGGAAC CTGGTTTTCT GTGGAAGGTA
TGGACAGAAA GTGAAAAGAA CCACGAAGCC GGTGGGATCT ACCTTTTTAC TGATGAAAAA
AGCGCCCTTG CCTATCTGGA AAAACATACT GCCCGACTGA AAAATCTCGG CGTTGAGGAA
GTTGTCGCCA AAGTTTTCGA TGTCAATGAG CCACTGAGTC AAATCAATCA GGCAAAACTC
GCCTGA
|
|---|
| Protein sequence | MATLLQLHFS FNGPFGDAMA EQLKPLAESI NQEPGFLWKV WTESEKNHEA GGIYLFTDEK
SALAYLEKHT ARLKNLGVEE VVAKVFDVNE PLSQINQAKL A
|
|---|
| |