Gene EcSMS35_1528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1528 
Symbol 
ID6144941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1513306 
End bp1514118 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content52% 
IMG OID641616406 
Producthypothetical protein 
Protein accessionYP_001743586 
Protein GI170680009 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000725408 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0000459629 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCATTA CACGAGCAGA CCTGCGAGAA TGGCGTATCG GAGCGGTGAT GTATCGCTGG 
TTCCTGCGCC ATTTCCCACG CGGCGGTAGT TATGCCGATA TTCATCATGC ACTGATTGAG
GAAGGATATA CGGACTGGGC GGAGAGTCTG GTTGAGTATG CGTGGAAAAA ATGGCTGGCG
GATGAAAACT TCGCGCATCA GGAAGTTTCT TCTATGCAAA AACTGGCCAC AGATCCCGGA
GAGAGAGCAT TTTGCAGTCA GTTTGCCCGC AGCGACGATC ATGCTCGCAT CGGCTGTTGT
GAGGATAATG CCAGAATCGC AACCGCTGGG TATGCCGCGC AAATTGCCAG TATGGGTTAT
AGCGTGCGGA TTGGAAGTGT CGGCTTTAAC AGTCACATTG GCAGCTCCGG TGAACGCGCA
CGGGTTGCTG TAACCGGTAA TTCTTCGCGG ATAAGCAGCG CTGGAGATAG TAGTCGGATT
GCGAATACCG GAATGCGAGT ACGCGTTTGT ACATTGGGTG AACGGTGTCA TGTCGCCAGT
AATGGTGATC TGGTGCAAAT CGCCAGCTTT GGCGCAAACG CCAGAATTGC CAACAGCGGC
GACAATGTAC ACATCATTGC CAGCGGTGAA AATTCAACGG TAGTGAGCAC GGGCGTGGTC
GACTCAATTA TTCTCGGGCC AGGAGGAAGC GCCGCACTGG CATATCATGA CGGTGAAAGA
GTTCGCTTCG CCGTCGCCAT TGAAGGTGAA AACAATATTC GAGCCGGAGT CCGCTATCGT
CTTAATGAAC AGCATCAGTT TGTTGAGTGC TGA
 
Protein sequence
MIITRADLRE WRIGAVMYRW FLRHFPRGGS YADIHHALIE EGYTDWAESL VEYAWKKWLA 
DENFAHQEVS SMQKLATDPG ERAFCSQFAR SDDHARIGCC EDNARIATAG YAAQIASMGY
SVRIGSVGFN SHIGSSGERA RVAVTGNSSR ISSAGDSSRI ANTGMRVRVC TLGERCHVAS
NGDLVQIASF GANARIANSG DNVHIIASGE NSTVVSTGVV DSIILGPGGS AALAYHDGER
VRFAVAIEGE NNIRAGVRYR LNEQHQFVEC