Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_1527 |
Symbol | |
ID | 6147017 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 1512517 |
End bp | 1513302 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641616405 |
Product | nickel-dependent hydrogenase, b-type cytochrome subunit |
Protein accession | YP_001743585 |
Protein GI | 170680766 |
COG category | [C] Energy production and conversion |
COG ID | [COG4117] Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000201966 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0000439849 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACCCGT CGCAACATGC TGAACAGTTT CAGAGCCAGT TGGCGAACTA TGTGCCACAG TTCACTCCCC AATTTTGGCC GGTGTGGTTG ATCATTGCCG GACTATTGCT GGTAGGGATG TGGTTGGTGC TGGGGCTGCA TGCCTTGCTT CGTGCTCGTG GCGTGAAGAA ATCAGCCACC GACCATGGTG AGAAGGTTTA TCTTTACAGC AAAGCGGTCA GATTATGGCA CTGGTCGAAT GCGTTACTCT TTGTATTGTT GCTGGCAAGT GGGCTGATAA ATCACTTTGC GCTGGTGGGC GCAACTGCGG TTAAAAGTCT GGTTGCGGTG CATGAAGTTT GCGGATTTTT GTTACTGGCA TGCTGGCTTG GCTTTGTTCT GATCAATGCC GTTGGGGGTA ATGGTCACCA CTATCGCATT CGTCGTCAGG GGTGGCTGGA GCGAGCGGCA AAACAAACGC GATTCTATTT GTTTGGCATT ATGCAGGGGG AAGAACATCC TTTCCCGGCA ACAACCCAGT CTAAATTTAA TCCCTTACAG CAGGTTGCCT ATATTGGTGT CATGTATGGA TTGCTGCCGT TGTTACTATT GACGGGGCTG CTGTGTCTCT ATCCGCAAGC CGTGGGAGAT GTGTTTCCTG GCGTAAGATA CTGGTTATTG CAGGCGCATT TTGCTCTGGC ATTTATAAGT CTCTTTTTTA TCTTCGGTCA TCTTTATCTT TGCACCACGG GGCGTACGCC ACACGAAACC TTTAAAAGCA TGGTCGATGG CTATCACCGG CACTAA
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Protein sequence | MNPSQHAEQF QSQLANYVPQ FTPQFWPVWL IIAGLLLVGM WLVLGLHALL RARGVKKSAT DHGEKVYLYS KAVRLWHWSN ALLFVLLLAS GLINHFALVG ATAVKSLVAV HEVCGFLLLA CWLGFVLINA VGGNGHHYRI RRQGWLERAA KQTRFYLFGI MQGEEHPFPA TTQSKFNPLQ QVAYIGVMYG LLPLLLLTGL LCLYPQAVGD VFPGVRYWLL QAHFALAFIS LFFIFGHLYL CTTGRTPHET FKSMVDGYHR H
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