Gene EcSMS35_1526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1526 
Symbol 
ID6146086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1511801 
End bp1512520 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content50% 
IMG OID641616404 
Productiron-sulfur cluster-binding protein 
Protein accessionYP_001743584 
Protein GI170682806 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000564469 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0000454418 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCATGGA TAGGGTGGAC AGTTGCAGCC ACTGCATTAG GGGATAATCA GATGTCCTTC 
ACTCGACGCA AATTTGTTCT GGGGATGGGA ACAGTAATCT TTTTTACTGG TTCTGCGTCT
TCTCTGTTAG CGAACACGAG GCAAGAAAAG AAAGTTCGGT ATGCCATGAT TCATGACGAG
TCACGGTGCA ATGGCTGTAA TATTTGCGCC CGCGCATGCC GTAAAACCAA TCACGTCCCC
GCTCAGGGAA GCCGTTTATC GATAGCACAC ATTCCAGTCA CCGATAACGA CAACGAAACG
CAGTATCACT TTTTTCGCCA GTCATGTCAG CACTGCGAAG ATGCTCCGTG CATCGACGTT
TGTCCGACAG CGGCATCGTG GCGTGATGAG CAGGGGATCG TACGGGTAGA AAAATCGCAG
TGCATCGGCT GCAGTTATTG CATTGGCGCT TGTCCTTACC AGGTTCGCTA CCTTAACCCT
GTCACTAAAG TGGCAGATAA ATGTGATTTC TGCGCTGAGT CCCGACTGGC AAAAGGCTTT
CCGCCCATTT GCGTCAGCGC CTGCCCGGAA CACGCCTTGA TCTTTGGTCG CGAAGATAGC
CCAGAAATTC AGGCGTGGTT GCAGGAAAAT AAATACTATC AATATCAGCT ACCTGGTGCC
GGGAAACCGC ACCTGTATCG CCGGTTCGGT CAACATTTGA TTAAAAAGGA AAATGTATGA
 
Protein sequence
MSWIGWTVAA TALGDNQMSF TRRKFVLGMG TVIFFTGSAS SLLANTRQEK KVRYAMIHDE 
SRCNGCNICA RACRKTNHVP AQGSRLSIAH IPVTDNDNET QYHFFRQSCQ HCEDAPCIDV
CPTAASWRDE QGIVRVEKSQ CIGCSYCIGA CPYQVRYLNP VTKVADKCDF CAESRLAKGF
PPICVSACPE HALIFGREDS PEIQAWLQEN KYYQYQLPGA GKPHLYRRFG QHLIKKENV