| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1514 |
|---|
| Symbol | sufC |
|---|
| ID | 6147471 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 1500352 |
|---|
| End bp | 1501098 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641616392 |
|---|
| Product | cysteine desulfurase ATPase component |
|---|
| Protein accession | YP_001743572 |
|---|
| Protein GI | 170683761 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0396] ABC-type transport system involved in Fe-S cluster assembly, ATPase component |
|---|
| TIGRFAM ID | [TIGR01978] FeS assembly ATPase SufC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.00000113093 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAGTA TTAAAGATTT ACACGTCAGC GTGGAAGATA AAGCTATCCT GCGTGGATTA
AGCCTCGACG TTCGTCCCGG CGAAGTTCAC GCCATTATGG GGCCAAACGG TTCTGGCAAA
AGTACCTTAT CGGCAACGCT TGCCGGGCGA GAAGATTATG AGGTGACGGG CGGCACGGTT
GAGTTCAAAG GCAAAGATTT GCTTGCGCTG TCGCCGGAAG ATCGTGCAGG TGAAGGCATC
TTTATGGCCT TCCAGTATCC GGTGGAAATT CCCGGCGTCA GTAACCAGTT TTTCCTGCAA
ACGGCACTTA ATGCGGTGCG CAGCTATCGC GGCCAGGAAA CGCTCGACCG CTTTGATTTT
CAGGATTTGA TGGAAGAGAA AATCGCTCTC CTGAAGATGC CGGAGGATTT ATTAACCCGT
TCGGTAAACG TTGGTTTTTC CGGCGGCGAG AAAAAGCGCA ACGATATTTT GCAAATGGCG
GTGCTGGAAC CGGAGTTATG CATTCTTGAT GAGTCGGACT CTGGGCTGGA TATTGACGCA
TTAAAAGTGG TTGCCGATGG CGTGAACTCG CTGCGTGACG GCAAGCGTTC ATTCATCATT
GTTACGCACT ACCAACGCAT TCTCGACTAC ATCAAGCCTG ATTACGTCCA TGTGCTGTAT
CAGGGACGAA TTGTGAAATC CGGCGATTTC ACGTTGGTCA AACAACTGGA GGAGCAGGGT
TATGGCTGGC TTACCGAACA GCAGTAA
|
|---|
| Protein sequence | MLSIKDLHVS VEDKAILRGL SLDVRPGEVH AIMGPNGSGK STLSATLAGR EDYEVTGGTV
EFKGKDLLAL SPEDRAGEGI FMAFQYPVEI PGVSNQFFLQ TALNAVRSYR GQETLDRFDF
QDLMEEKIAL LKMPEDLLTR SVNVGFSGGE KKRNDILQMA VLEPELCILD ESDSGLDIDA
LKVVADGVNS LRDGKRSFII VTHYQRILDY IKPDYVHVLY QGRIVKSGDF TLVKQLEEQG
YGWLTEQQ
|
|---|
| |