Gene EcSMS35_1513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1513 
SymbolsufB 
ID6147175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1498855 
End bp1500342 
Gene Length1488 bp 
Protein Length495 aa 
Translation table11 
GC content52% 
IMG OID641616391 
Productcysteine desulfurase activator complex subunit SufB 
Protein accessionYP_001743571 
Protein GI170683248 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component 
TIGRFAM ID[TIGR01980] FeS assembly protein SufB 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.00000205188 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTCGTA ATACTGAAGC AACTGACGAT GTCAAAACCT GGACCGGCGG CCCGCTGAAT 
TATAAAGAAG GATTCTTCAC CCAGTTAGCC ACCGATGAGC TGGCAAAGGG GATAAACGAA
GAGGTGGTGC GCGCAATTTC GGCGAAGCGT AATGAGCCGG AGTGGATGCT GGAGTTTCGT
CTCAACGCCT ATCGCGCATG GCTGGAGATG GAAGAACCGC ACTGGTTGAA AGCGCACTAC
GACAAGCTGA ATTATCAGGA TTACAGCTAC TACTCAGCAC CATCGTGCGG TAATTGTGAC
GACAACTGCG CGTCTGAACC CGGCGCGGTG CAGCAAACTG GTGCGAACGC CTTTTTAAGT
AAAGAGGTGG AGGCGGCGTT TGAGCAGTTG GGCGTTCCCG TGCGGGAAGG CAAAGAGGTG
GCGGTGGATG CCATTTTCGA CTCTGTTTCG GTTGCCACCA CTTATCGTGA AAAACTGGCG
GAGCAGGGAA TTATTTTCTG TTCCTTTGGC GAGGCGATCC ACGATCACCC GGAACTTGTG
CGTAAATATC TCGGCACCGT GGTGCCGGGG AATGACAACT TCTTTGCCGC ACTTAATGCG
GCGGTAGCCT CTGACGGAAC GTTTATTTAT GTGCCTAAAG GCGTGCGCTG CCCGATGGAA
CTTTCCACCT ATTTTCGCAT TAACGCGGAA AAAACAGGGC AGTTTGAGCG CACCATTCTG
GTGGCCGACG AAGACAGCTA TGTCAGCTAC ATTGAAGGCT GTTCCGCTCC GGTGCGTGAC
AGCTATCAGT TACACGCGGC GGTGGTTGAA GTCATCATCC ATAAAAACGC CGAGGTGAAA
TATTCCACGG TACAAAACTG GTTCCCTGGC GATAACAACA CCGGCGGTAT TCTCAACTTC
GTCACCAAGC GTGCTTTGTG CGAAGGCGAA AACAGCAAAA TGTCATGGAC GCAATCAGAA
ACCGGGTCAG CGATTACGTG GAAATATCCC AGTTGCATTT TGCGCGGCGA TAACTCCATT
GGTGAGTTTT ACTCAGTGGC ACTGACCAGC GGTCATCAGC AAGCGGATAC CGGCACCAAG
ATGATCCACA TCGGTAAAAA CACCAAATCG ACCATTATCT CGAAAGGGGT CTCTGCCGGA
CATAGTCAGA ACAGTTATCG CGGCTTAGTG AAAATCATGC CGACGGCAAC CAATGCGCGC
AATTTCACTC AGTGCGACTC AATGCTGATT GGCGCTAATT GTGGGGCGCA TACCTTCCCG
TATGTCGAAT GTCGCAATAA CAGCGCACAA CTGGAGCACG AGGCAACGAC ATCACGTATT
GGTGAAGATC AACTGTTTTA CTGCCTGCAA CGCGGGATCA GCGAAGAAGA CGCCATCTCG
ATGATTGTTA ACGGTTTCTG CAAAGACGTG TTCTCAGAAC TGCCGCTGGA ATTTGCCGTT
GAAGCACAAA AACTCCTCGC CATCAGTCTT GAACACAGCG TCGGATAA
 
Protein sequence
MSRNTEATDD VKTWTGGPLN YKEGFFTQLA TDELAKGINE EVVRAISAKR NEPEWMLEFR 
LNAYRAWLEM EEPHWLKAHY DKLNYQDYSY YSAPSCGNCD DNCASEPGAV QQTGANAFLS
KEVEAAFEQL GVPVREGKEV AVDAIFDSVS VATTYREKLA EQGIIFCSFG EAIHDHPELV
RKYLGTVVPG NDNFFAALNA AVASDGTFIY VPKGVRCPME LSTYFRINAE KTGQFERTIL
VADEDSYVSY IEGCSAPVRD SYQLHAAVVE VIIHKNAEVK YSTVQNWFPG DNNTGGILNF
VTKRALCEGE NSKMSWTQSE TGSAITWKYP SCILRGDNSI GEFYSVALTS GHQQADTGTK
MIHIGKNTKS TIISKGVSAG HSQNSYRGLV KIMPTATNAR NFTQCDSMLI GANCGAHTFP
YVECRNNSAQ LEHEATTSRI GEDQLFYCLQ RGISEEDAIS MIVNGFCKDV FSELPLEFAV
EAQKLLAISL EHSVG