| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1510 |
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| Symbol | ydiL |
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| ID | 6145707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1497231 |
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| End bp | 1497641 |
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| Gene Length | 411 bp |
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| Protein Length | 136 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641616388 |
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| Product | hypothetical protein |
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| Protein accession | YP_001743568 |
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| Protein GI | 170682148 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
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| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.564013 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.000000864197 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGATATGGA AACGAAAAAT CACCCTGGAA GCATTGAATG CTATGGGTGA AGGAAACATG
GTGGGGTTGC TGGATATTCG CTTTGAACAT ATTGGTGATG ACACCCTTGA AGCGACAATG
CCAGTAGACT CCCGGACAAA GCAGCCTTTC GGGTTGCTGC ATGGAGGCGC GTCTGTGGTG
CTGGCCGAAA GTATCGGTTC CGTTGCCGGT TATTTATGTA CCGAAGGTGA GCAAAAGGTG
GTTGGTCTGG AAATCAATGC TAACCACGTC CGCTCGGCAC GAGAAGGGCG GGTGCGCGGC
GTATGCAAAC CGTTGCATCT CGGTTCGCGT CACCAGGTCT GGCAGATTGA AATCTTCGAT
GAGAAAGGGC GTTTGTGCTG TTCGTCACGA TTGACGACCG CCATTTTGTG A
|
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| Protein sequence | MIWKRKITLE ALNAMGEGNM VGLLDIRFEH IGDDTLEATM PVDSRTKQPF GLLHGGASVV
LAESIGSVAG YLCTEGEQKV VGLEINANHV RSAREGRVRG VCKPLHLGSR HQVWQIEIFD
EKGRLCCSSR LTTAIL
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