Gene EcSMS35_1496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1496 
Symbol 
ID6142960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1480177 
End bp1481466 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content54% 
IMG OID641616374 
Producthypothetical protein 
Protein accessionYP_001743554 
Protein GI170684211 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.403861 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGATG ACAAATTTGA TGCCATTGTG GTCGGTGCGG GCGTTGCCGG TAGCGTTGCC 
GCACTGGTCA TGGCGCAAGC CGGGCTGGAT GTCCTGGTGA TAGAACGCGG CGACAGTGCC
GGATGTAAAA ACATGACCGG CGGGCGTCTT TATGCCCACA CACTTGAAGC GATTATTCCA
GGCTTTGCAG CATCAGCGCC GGTAGAACGC AAGGTCACAC GCGAGAAAAT CTCCTTCTTA
ACCGATGAGA GTGCCGTTAC CCTCGATTTT CACCGCGAGC AACCAGATGT TCCGCAACAC
GCGTCTTATA CCGTATTGCG TAATCGTCTG GACCCGTGGT TGATGGAACA AGCCGAACAG
GCTGGCGCGC AGTTTATCCC GGGCGTTCGT GTCGATGCGC TGGTTCGTGA AGGAAATAAG
GTCACTGGCG TCCAGGCCGG GGATGATATT CTCGAAGCGA ATGTGGTGAT TCTGGCTGAT
GGCGTTAACT CGATGCTTGG CCGCTCGCTG GGAATGGTTC CCGCTTCCGA TCCGCATCAT
TACGCTGTTG GTGTTAAAGA GGTTATTGGC CTCACACCAG AACAGATCAA GGATCGCTTT
AATATTACGG GCGAGGAAGG TGCCGCCTGG CTGTTTGCCG GTTCCCCTTC TGACGGCCTG
ATGGGCGGCG GATTCCTCTA TACCAATAAG GATTCCATAT CGTTGGGGCT GGTTTGTGGA
TTGGGTGATA TCGCCCATGC GCAAAAAAGC GTGCCGCAAA TGCTGGAAGA TTTTAAACAA
CACCCCGCCA TTCACCCGCT GATTAGCGGC GGCAAACTGC TTGAATATTC CGCGCATATG
GTGCCGGAGG GCGGTCTGGC AATGGTGCCG CAGCTGGTTA ACGATGGCGT GATGATCGTT
GGTGACGCCG CAGGCTTCTG CCTGAATTTG GGTTTTACAG TTCGCGGCAT GGATTTAGCC
ATTGCATCAG CTCAGGCTGC CGCCACAACA GTGATTGCAG CCAAAGAACG CGCGGATTTC
TCCGCCAGCA GTCTGGCGCA ATACAAACGT GAGCTGGAAC AAAGCTGCGT CATGCGTGAT
ATGCAGCATT TTCGCAAGAT CCCGGCGCTG ATGGAAAATC CGCGCCTGTT TAGTCAGTAT
CCGCGCATGG TCGCCGACAT CATGAACGAG ATGTTCACCA TTGACGGCAA ACCAAACCAG
CCGGTACGCA AAATGATCAT GGGACACGCG AAGAAAATTG GGCTGATCAA CTTGCTGAAA
GATGGCATTA AGGGAGCAAC CGCGCTATGA
 
Protein sequence
MSDDKFDAIV VGAGVAGSVA ALVMAQAGLD VLVIERGDSA GCKNMTGGRL YAHTLEAIIP 
GFAASAPVER KVTREKISFL TDESAVTLDF HREQPDVPQH ASYTVLRNRL DPWLMEQAEQ
AGAQFIPGVR VDALVREGNK VTGVQAGDDI LEANVVILAD GVNSMLGRSL GMVPASDPHH
YAVGVKEVIG LTPEQIKDRF NITGEEGAAW LFAGSPSDGL MGGGFLYTNK DSISLGLVCG
LGDIAHAQKS VPQMLEDFKQ HPAIHPLISG GKLLEYSAHM VPEGGLAMVP QLVNDGVMIV
GDAAGFCLNL GFTVRGMDLA IASAQAAATT VIAAKERADF SASSLAQYKR ELEQSCVMRD
MQHFRKIPAL MENPRLFSQY PRMVADIMNE MFTIDGKPNQ PVRKMIMGHA KKIGLINLLK
DGIKGATAL