Gene EcSMS35_1492 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1492 
Symbol 
ID6145650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1476904 
End bp1477383 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content40% 
IMG OID641616370 
Producthypothetical protein 
Protein accessionYP_001743550 
Protein GI170682152 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2731] Beta-galactosidase, beta subunit 
TIGRFAM ID[TIGR00022] uncharacterized protein, YhcH/YjgK/YiaL family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.78533 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTATG GTGATATCGC GTATCTTAGT GAACAACAAA AGCGGACATT TCATCCTGTC 
ATCACTCGTG TCATTGAGTA TCTTTCACAA CATGATCTGA ATAGTCTTCC TGTGGGAGAG
AAGGTTTTTA TTCAGGATGA CTCAATATTT TATACCGTGG TTGAACCGAT GACTAAACCA
CTACATGAAT GTCGACCGGA AGTTCATCGT AAATATCTTG ATGTCCATTT TTTAATTGCC
GGAGAAGAGC GGATTTGTGT GGATTTTGAT GATGGGGAAA ACTCGGTTGT AGAAAGCCAC
CTGGGCGACC GTGATGTTAT TTTTTATGCT GATGAACGTA TTAATGATCG AATCATCACG
CTGACACCAG GACAGTTTGT GGTGGTCTTT CCGGAAGAAG TGCATCGGGC ATGCTATAAA
ATCGATAACG TGGAAAAAAT CAAAAAAACA GTCGTGAAAA TCGACATGAG TTTATTATAG
 
Protein sequence
MIYGDIAYLS EQQKRTFHPV ITRVIEYLSQ HDLNSLPVGE KVFIQDDSIF YTVVEPMTKP 
LHECRPEVHR KYLDVHFLIA GEERICVDFD DGENSVVESH LGDRDVIFYA DERINDRIIT
LTPGQFVVVF PEEVHRACYK IDNVEKIKKT VVKIDMSLL