Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_1489 |
Symbol | ppsA |
ID | 6142753 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 1471631 |
End bp | 1474009 |
Gene Length | 2379 bp |
Protein Length | 792 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641616367 |
Product | phosphoenolpyruvate synthase |
Protein accession | YP_001743547 |
Protein GI | 170682331 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
TIGRFAM ID | [TIGR01418] phosphoenolpyruvate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAACA ATGGCTCGTC ACCGCTGGTG CTTTGGTATA ACCAACTCGG CATGAATGAT GTAGACAGGG TTGGGGGCAA AAATGCCTCC CTGGGTGAAA TGATTACTAA CCTTTCCGGA ATGGGTGTTT CCGTTCCGAA TGGTTTCGCC ACAACCGCCG ACGCGTTTAA CCAGTTTCTG GACCAAAGCG GCGTAAACCA GCGCATTTAT GAACTGCTGG ATAAAACGGA TATTGACGAT GTTACCCAGC TTGCGAAAGC GGGCGCGCAA ATCCGCCAGT GGATTATCGA CACTCCCTTC CAGCCTGAGC TGGAAAACGC CATCCGCGAA GCCTATGCAC AGCTTTCCGC CGATGACGAA AACGCCTCGT TTGCGGTGCG TTCCTCCGCT ACTGCAGAAG ATATGCCGGA CGCTTCTTTT GCCGGTCAGC AGGAAACCTT CCTCAACGTT CAGGGTTTTG ACGCCGTTCT CGTGGCAGTG AAACATGTAT TTGCTTCTCT GTTTAACGAT CGCGCCATCT CTTATCGTGT GCACCAGGGT TACGATCACC GTGGCGTGGC GCTCTCCGCC GGTGTTCAGC GGATGGTGCG CTCCGACCTC GCATCTTCTG GCGTGATGTT CTCCATTGAT ACCGAATCCG GCTTTGACCA GGTGGTGTTT ATCACTTCCG CATGGGGCCT TGGTGAAATG GTCGTGCAGG GTGCGGTTAA CCCGGATGAG TTTTACGTGC ACAAACCGAC ACTGGCGGCG AATCGCCCGG CTATCGTGCG CCGCACCATG GGGTCGAAAA AAATCCGCAT GGTTTACGCG CCGACCCAGG AGCACGGCAA GCAGGTTAAA ATCGAAGACG TACCGCAGGA ACAGCGTGAC ATCTTCTCGC TGACCAACGA AGAAGTGCAG GAACTGGCAA AACAGGCCGT ACAAATTGAG AAACACTACG GTCGCCCGAT GGATATTGAG TGGGCGAAAG ATGGCCACAC CGGCAAACTG TTCATTGTGC AGGCGCGTCC GGAAACCGTG CGCTCACGCG GTCAGGTCAT GGAGCGTTAT ACGCTGCATT CACAGGGTAA GATTATCGCC GAAGGCCGTG CTATCGGTCA TCGCATCGGC GCGGGTCCGG TGAAAGTCAT CCATGACATC AGCGAAATGA ACCGCATCGA ACCTGGTGAC GTGCTGGTTA CTGACATGAC CGACCCGGAC TGGGAACCGA TCATGAAGAA AGCATCTGCC ATCGTCACCA ACCGTGGCGG TCGTACCTGT CACGCGGCGA TCATCGCTCG TGAACTCGGC ATTCCGGCGG TAGTGGGCTG TGGTGATGCA ACAGAACGGA TGAAAGACGG TGAGAACGTC ACTGTTTCTT GTGCCGAAGG TGATACCGGT TATGTCTATG CGGAGTTGCT GGAATTTAGC GTGAAAAGCT CCAGCGTAGA AACGATGCCG GACCTGCCGT TGAAGGTGAT GATGAACGTC GGTAACCCGG ATCGTGCTTT CGACTTCGCC TGCCTGCCGA ACGAAGGCGT GGGCCTTGCG CGTCTGGAAT TTATCATCAA CCGTATGATT GGCGTCCACC CACGCGCGCT GCTTGAGTTT GACGATCAAG AACCGCAGTT GCAAAACGAA ATCCGCGAGA TGATGAAAGG TTTTGATTCT CCGCGTGAAT TTTACGTTGG TCGTCTGACT GAAGGGATCG CGACGCTGGG TGCCGCGTTT TATCCGAAGC GCGTCATTGT CCGTCTCTCT GATTTTAAAT CGAACGAATA TGCCAACCTG GTCGGTGGTG AGCGTTACGA GCCAGATGAA GAGAACCCGA TGCTCGGCTT CCGTGGCGCG GGCCGCTATG TTTCCGACAG CTTCCGCGAC TGCTTCGCGC TGGAGTGTGA AGCAGTGAAA CGTGTGCGCA ACGACATGGG GCTGACCAAC GTTGAGATCA TGATCCCGTT CGTGCGTACC GTAGATCAGG CGAAAGCGGT GGTTGAGGAA CTGGCGCGTC AGGGGCTGAA ACGTGGTGAG AACGGGCTGA AAATCATCAT GATGTGTGAA ATCCCGTCCA ACGCCTTGCT GGCCGAGCAG TTCCTCGAAT ATTTCGACGG CTTCTCAATT GGCTCAAACG ACATGACGCA GCTGGCGCTC GGTCTGGATC GTGACTCCGG CGTGGTATCT GAACTGTTCG ATGAGCGCAA CGATGCGGTG AAAGCACTGC TGTCGATGGC GATTCGTGCC GCGAAGAAAC AGGGCAAATA TGTCGGGATT TGCGGTCAGG GTCCATCCGA CCACGAAGAC TTTGCTGCAT GGTTGATGGA AGAGGGGATC GATAGCCTGT CTCTTAACCC GGACACCGTG GTGCAAACCT GGTTAAGTCT GGCTGAACTT AACAAGTAA
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Protein sequence | MSNNGSSPLV LWYNQLGMND VDRVGGKNAS LGEMITNLSG MGVSVPNGFA TTADAFNQFL DQSGVNQRIY ELLDKTDIDD VTQLAKAGAQ IRQWIIDTPF QPELENAIRE AYAQLSADDE NASFAVRSSA TAEDMPDASF AGQQETFLNV QGFDAVLVAV KHVFASLFND RAISYRVHQG YDHRGVALSA GVQRMVRSDL ASSGVMFSID TESGFDQVVF ITSAWGLGEM VVQGAVNPDE FYVHKPTLAA NRPAIVRRTM GSKKIRMVYA PTQEHGKQVK IEDVPQEQRD IFSLTNEEVQ ELAKQAVQIE KHYGRPMDIE WAKDGHTGKL FIVQARPETV RSRGQVMERY TLHSQGKIIA EGRAIGHRIG AGPVKVIHDI SEMNRIEPGD VLVTDMTDPD WEPIMKKASA IVTNRGGRTC HAAIIARELG IPAVVGCGDA TERMKDGENV TVSCAEGDTG YVYAELLEFS VKSSSVETMP DLPLKVMMNV GNPDRAFDFA CLPNEGVGLA RLEFIINRMI GVHPRALLEF DDQEPQLQNE IREMMKGFDS PREFYVGRLT EGIATLGAAF YPKRVIVRLS DFKSNEYANL VGGERYEPDE ENPMLGFRGA GRYVSDSFRD CFALECEAVK RVRNDMGLTN VEIMIPFVRT VDQAKAVVEE LARQGLKRGE NGLKIIMMCE IPSNALLAEQ FLEYFDGFSI GSNDMTQLAL GLDRDSGVVS ELFDERNDAV KALLSMAIRA AKKQGKYVGI CGQGPSDHED FAAWLMEEGI DSLSLNPDTV VQTWLSLAEL NK
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