Gene EcSMS35_1487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1487 
Symbol 
ID6145505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1470466 
End bp1471299 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content51% 
IMG OID641616365 
Producthypothetical protein 
Protein accessionYP_001743545 
Protein GI170682773 
COG category[S] Function unknown 
COG ID[COG1806] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value0.88593 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAATG CTGTTGATCG CCACGTTTTT TATATTTCTG ATGGTACGGC AATAACTGCG 
GAGGTATTAG GACACGCAGT AATGTCACAA TTTCCCGTCA CTATCAGCAG CATTACGCTG
CCGTTTGTCG AAAATGAGAG CCGTGCACGG GCAGTGAAGG ATCAGATTGA CGCAATTTAT
CACCAGACAG GCGTGCGCCC GCTGGTCTTC TACTCCATCG TGTTGCCGGA GATTCGCGCC
ATCATCTTGC AAAGTGAGGG CTTTTGCCAG GATATCGTTC AGGCGCTGGT TGCCCCGCTA
CAACAAGAGA TGAAACTGGA TCCCACGCCG ATTGCTCATC GTACCCATGG CCTGAACCCT
AATAACCTCA ATAAATATGA TGCGCGTATT GCGGCGATTG ATTACACCCT TGCCCATGAC
GACGGCATTT CGTTGCGCAA TCTGGACCAG GCTCAGGTGA TCCTGCTCGG TGTTTCTCGC
TGTGGTAAAA CCCCCACCAG TCTGTATCTG GCAATGCAAT TTGGTATCCG CGCGGCAAAC
TACCCCTTTA TTGCCGACGA TATGGATAAT CTGGTGCTAC CCGCGTCGCT CAAACCGCTT
CAGCACAAAT TGTTCGGCCT GACTATCGAC CCGGAACGTC TGGCGGCGAT TCGCGAGGAA
CGTCGGGAGA ACAGTCGCTA TGCCTCGCTT CGTCAGTGCA GGATGGAAGT CGCGGAAGTG
GAAGCGTTGT ACCGTAAAAA TCAGATCCCG TGGATTAACA GTACCAATTA TTCGGTAGAA
GAGATTGCCA CCAAGATCCT CGATATCATG GGCCTTAGCC GTCGAATGTA CTAG
 
Protein sequence
MDNAVDRHVF YISDGTAITA EVLGHAVMSQ FPVTISSITL PFVENESRAR AVKDQIDAIY 
HQTGVRPLVF YSIVLPEIRA IILQSEGFCQ DIVQALVAPL QQEMKLDPTP IAHRTHGLNP
NNLNKYDARI AAIDYTLAHD DGISLRNLDQ AQVILLGVSR CGKTPTSLYL AMQFGIRAAN
YPFIADDMDN LVLPASLKPL QHKLFGLTID PERLAAIREE RRENSRYASL RQCRMEVAEV
EALYRKNQIP WINSTNYSVE EIATKILDIM GLSRRMY