Gene EcSMS35_1486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1486 
SymbolaroH 
ID6145865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1469263 
End bp1470309 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content53% 
IMG OID641616364 
Productphospho-2-dehydro-3-deoxyheptonate aldolase 
Protein accessionYP_001743544 
Protein GI170681321 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 
TIGRFAM ID[TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.803184 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGAA CTGACGAACT CCGTACTGCG CGTATTGAGA GCCTGGTAAC GCCCGCCGAA 
CTCGCGCTAC GGTATCCCGT AACGCCTGGC GTCGCCACCC ATGTCACCGA CTCCCGCCGC
AGAATTGAAA AAATACTGAA TGGTGAAGAT AAGCGACTGT TGGTCATTAT TGGCCCCTGC
TCGATCCACG ATCTCACCGC TGCAATGGAG TACGCCACCC GTCTGCAGTC GCTGCGCAAC
CAGTACCAGT CACGGCTGGA AATCGTAATG CGCACCTATT TTGAAAAACC ACGAACTGTT
GTCGGCTGGA AAGGACTCAT CTCCGATCCA GATTTAAACG GTAGCTATCG GGTAAATCAC
GGTCTGGAGC TGGCGCGCAA ATTACTTTTA CAGGTAAATG AGCTGGGCGT CCCTACCGCG
ACTGAGTTCC TCGATATGGT GACCGGTCAG TTTATTGCTG ATTTAATCAG TTGGGGCGCG
ATTGGCGCTC GTACTACCGA AAGTCAGATC CACCGCGAAA TGGCTTCAGC ACTCTCCTGT
CCGGTAGGTT TTAAAAATGG TACCGATGGC AACACGCGGA TTGCCGTGGA TGCTATCCGC
GCAGCCCGCG CCAGCCATAT GTTCCTCTCA CCAGACAAAA ACGGTCAGAT GACCATCTAT
CAGACCAGTG GCAACCCGTA TGGCCATATT ATTATGCGTG GCGGCAAAAA ACCGAATTAC
CATGCCGATG ATATCGCCGC AGCCTGCGAT ACGCTGCACG AGTTTGATTT ACCTGAACAT
CTGGTGGTGG ATTTCAGCCA CGGTAACTGC CAGAAGCAGC ACCGTCGCCA GTTAGAAGTT
TGTGAGGATA TTTGTCAGCA AATCCGCAAT GGCTCTACGG CGATTGCTGG AATTATGGCG
GAAAGTTTCC TGCGCGAAGG AACGCAAAAA ATCGTCGGCG GTCAGCCGCT CACTTACGGT
CAATCGATTA CCGACCCGTG TCTGGGCTGG GAAGATACCG AACGCCTGGT CGAAAAACTC
GCCTCTGCGG TTGATACCCG CTTCTGA
 
Protein sequence
MNRTDELRTA RIESLVTPAE LALRYPVTPG VATHVTDSRR RIEKILNGED KRLLVIIGPC 
SIHDLTAAME YATRLQSLRN QYQSRLEIVM RTYFEKPRTV VGWKGLISDP DLNGSYRVNH
GLELARKLLL QVNELGVPTA TEFLDMVTGQ FIADLISWGA IGARTTESQI HREMASALSC
PVGFKNGTDG NTRIAVDAIR AARASHMFLS PDKNGQMTIY QTSGNPYGHI IMRGGKKPNY
HADDIAAACD TLHEFDLPEH LVVDFSHGNC QKQHRRQLEV CEDICQQIRN GSTAIAGIMA
ESFLREGTQK IVGGQPLTYG QSITDPCLGW EDTERLVEKL ASAVDTRF