Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_1458 |
Symbol | |
ID | 6144572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 1441963 |
End bp | 1442712 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641616336 |
Product | hypothetical protein |
Protein accession | YP_001743516 |
Protein GI | 170682490 |
COG category | [S] Function unknown |
COG ID | [COG3394] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.890936 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 0.315739 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACGCT TACTGATTGT TAATGCCGAT GATTTTGGTT TAAGCAAAGG TCAGAACTAC GGCATTATCG AGGCCTGTCG CAATGGGATT GTCACATCGA CGACGGCGCT GGTGAATGGG CAGGCTATTG ATCATGCGGT GCAGTTGAGT CGTGATGAAC CGAGTCTGGC CATAGGGATG CACTTTGTCC TTACTATGGG CAAGCCACTG ACAGCTATGC CGGGGTTAAC CCGCGATGGT GTGCTGGGAA AATGGATCTG GCAGTTGGCA GAAGAAGATG CTTTACCGCT GGAAGAAATT ACTCAGGAGC TCGCCAGTCA GTATTTGCGT TTCATTGAGC TATTTGGACG CAAACCTACG CATCTTGATA GCCATCATCA TGTGCATATG TTCCCGCAGA TTTTCCCGAT TGTTGCCAGG TTTGCGGCTG AAGAGGGCAT TGCGTTGCGG GCGGATCGTC AGATGGTGTT TGATTTGCCG GTCAACCTGC GCACTACCCA GGGATTCAGC AGTGCATTCT ACGGTGAAGA GATCAGTGAG TCGCTGTTCC TGCAAGTGCT TGATGACTCC AGTCATCGCG GCGAGCGCTC TCTGGAAGTG ATGTGCCACC CGGCGTTTAT CGATAATACG ATTCGCCAGA GTGCTTATTG CTTCCCTCGG TTAACGGAAC TGGATGTGCT GACTTCAGCG TCGTTGAAAT ATGCGATTGC TGAGCGTGGT TATCGGTTGG GTAGTTATCT TGATGTGTAA
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Protein sequence | MERLLIVNAD DFGLSKGQNY GIIEACRNGI VTSTTALVNG QAIDHAVQLS RDEPSLAIGM HFVLTMGKPL TAMPGLTRDG VLGKWIWQLA EEDALPLEEI TQELASQYLR FIELFGRKPT HLDSHHHVHM FPQIFPIVAR FAAEEGIALR ADRQMVFDLP VNLRTTQGFS SAFYGEEISE SLFLQVLDDS SHRGERSLEV MCHPAFIDNT IRQSAYCFPR LTELDVLTSA SLKYAIAERG YRLGSYLDV
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