Gene EcSMS35_1458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1458 
Symbol 
ID6144572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1441963 
End bp1442712 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content51% 
IMG OID641616336 
Producthypothetical protein 
Protein accessionYP_001743516 
Protein GI170682490 
COG category[S] Function unknown 
COG ID[COG3394] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.890936 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.315739 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGCT TACTGATTGT TAATGCCGAT GATTTTGGTT TAAGCAAAGG TCAGAACTAC 
GGCATTATCG AGGCCTGTCG CAATGGGATT GTCACATCGA CGACGGCGCT GGTGAATGGG
CAGGCTATTG ATCATGCGGT GCAGTTGAGT CGTGATGAAC CGAGTCTGGC CATAGGGATG
CACTTTGTCC TTACTATGGG CAAGCCACTG ACAGCTATGC CGGGGTTAAC CCGCGATGGT
GTGCTGGGAA AATGGATCTG GCAGTTGGCA GAAGAAGATG CTTTACCGCT GGAAGAAATT
ACTCAGGAGC TCGCCAGTCA GTATTTGCGT TTCATTGAGC TATTTGGACG CAAACCTACG
CATCTTGATA GCCATCATCA TGTGCATATG TTCCCGCAGA TTTTCCCGAT TGTTGCCAGG
TTTGCGGCTG AAGAGGGCAT TGCGTTGCGG GCGGATCGTC AGATGGTGTT TGATTTGCCG
GTCAACCTGC GCACTACCCA GGGATTCAGC AGTGCATTCT ACGGTGAAGA GATCAGTGAG
TCGCTGTTCC TGCAAGTGCT TGATGACTCC AGTCATCGCG GCGAGCGCTC TCTGGAAGTG
ATGTGCCACC CGGCGTTTAT CGATAATACG ATTCGCCAGA GTGCTTATTG CTTCCCTCGG
TTAACGGAAC TGGATGTGCT GACTTCAGCG TCGTTGAAAT ATGCGATTGC TGAGCGTGGT
TATCGGTTGG GTAGTTATCT TGATGTGTAA
 
Protein sequence
MERLLIVNAD DFGLSKGQNY GIIEACRNGI VTSTTALVNG QAIDHAVQLS RDEPSLAIGM 
HFVLTMGKPL TAMPGLTRDG VLGKWIWQLA EEDALPLEEI TQELASQYLR FIELFGRKPT
HLDSHHHVHM FPQIFPIVAR FAAEEGIALR ADRQMVFDLP VNLRTTQGFS SAFYGEEISE
SLFLQVLDDS SHRGERSLEV MCHPAFIDNT IRQSAYCFPR LTELDVLTSA SLKYAIAERG
YRLGSYLDV