| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1452 |
|---|
| Symbol | osmE |
|---|
| ID | 6144647 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 1436843 |
|---|
| End bp | 1437181 |
|---|
| Gene Length | 339 bp |
|---|
| Protein Length | 112 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641616330 |
|---|
| Product | DNA-binding transcriptional activator OsmE |
|---|
| Protein accession | YP_001743510 |
|---|
| Protein GI | 170679970 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 0.257191 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAGA ATATGGCAGG AATTCTGAGT GCAGCGGCGG TATTAACCAT GCTGGCGGGT
TGTACGGCTT ATGATCGTAC CAAAGACCAG TTTGTACAGC CTGTGGTGAA AGACGTCAAA
AAAGGCATGA GCCGGGCGCA GGTTGCACAA ATTGCGGGTA AACCTTCGTC TGAAGTGAGC
ATGATCCATG CTCGTGGTAC TTGCCAGACC TACATCCTGG GTCAACGTGA TGGTAAAGCA
GAAACCTACT TTGTCGCGTT AGATGATACC GGACATGTCA TCAACTCCGG TTATCAGACC
TGTGCTGAAT ACGACACTGA TCCACAGGCT GCGAAGTAA
|
|---|
| Protein sequence | MNKNMAGILS AAAVLTMLAG CTAYDRTKDQ FVQPVVKDVK KGMSRAQVAQ IAGKPSSEVS
MIHARGTCQT YILGQRDGKA ETYFVALDDT GHVINSGYQT CAEYDTDPQA AK
|
|---|
| |