| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1443 |
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| Symbol | astC |
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| ID | 6144859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1427117 |
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| End bp | 1428337 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641616321 |
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| Product | bifunctional succinylornithine transaminase/acetylornithine transaminase |
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| Protein accession | YP_001743501 |
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| Protein GI | 170680032 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
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| TIGRFAM ID | [TIGR00707] acetylornithine and succinylornithine aminotransferases
[TIGR03246] succinylornithine transaminase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.656199 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCAGC CAATTACGCG TGAAAACTTT GATGAATGGA TGATACCTGT TTACGCTCCG
GCACCGTTTA TACCGGTACG TGGCGAAGGT TCGCGCTTGT GGGATCAGCA GGGGAAAGAG
TATATCGACT TCGCGGGTGG CATTGCGGTG AACGCGCTGG GCCATGCGCA TCCGGAACTG
CGTGAGGCGC TGAACGAACA GGCGAGTAAG TTCTGGCATA CCGGCAACGG TTACACCAAC
GAGCCGGTAC TGCGACTGGC GAAAAAATTG ATCGACGCCA CGTTTGCCGA TCGCGTCTTC
TTTTGTAACT CCGGTGCGGA AGCCAACGAA GCGGCGCTAA AACTGGCGCG TAAATTCGCT
CACGACCGCT ACGGCAGCCA TAAGAGCGGC ATCGTGGCGT TCAAAAATGC GTTTCATGGT
CGCACGCTGT TTACTGTCAG TGCGGGTGGG CAGCCAGCCT ATTCACAGGA TTTTGCGCCA
CTGCCGCCGG ATATTCATCA TGCTGCATAT AACGATATTA ACTCTGCCAG TGCGCTGATT
GACGACGCCA CCTGTGCGGT GATTGTCGAA CCCATCCAGG GGGAAGGCGG TGTGGTGCCA
GCCAGCAACG CATTTTTACA AGGTCTGCGT GAATTGTGTG ACCGCCACAA TGCGTTGCTG
ATCTTTGATG AAGTACAAAC CGGTGTCGGG CGCACCGGGG AACTGTATGC CTATATGCAC
TACGGCGTGA CGCCTGATCT GTTAACTACC GCCAAAGCGC TGGGCGGCGG TTTCCCGGTT
GGTGCGTTGT TGGCAACCGA AGAGTGCGCC AGCGTGATGA CCGTTGGCAC TCACGGCACC
ACCTATGGCG GCAATCCGCT GGCCTCGGCG GTGGCAGGCA AAGTGCTGGA TCTCATCAAC
ACGCCAGAGA TGCTTAACGG GGTTAAACAG CGTCACGACT GGTTTGTTGA GCGTCTAAAT
TCCATTAATC ACCACTACGG TTTGTTCAGT GAAGTTCGCG GCTTAGGTTT GTTGATTGGT
TGCGTGTTGA ATGCCGATTA CGCCGGGCAA GCGAAACAGA TCTCTCAGGA AGCGGCGAAA
GCAGGCGTGA TGGTACTGAT TGCGGGTGGC AACGTGGTGC GTTTTGCGCC TGCGCTCAAT
GTCAGCGAAG AAGAGGTGAC GACCGGACTG GATCGCTTTG CAGCTGCTTG CGAACACTTT
GTTAGCCGAG GTTCATCATG A
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| Protein sequence | MSQPITRENF DEWMIPVYAP APFIPVRGEG SRLWDQQGKE YIDFAGGIAV NALGHAHPEL
REALNEQASK FWHTGNGYTN EPVLRLAKKL IDATFADRVF FCNSGAEANE AALKLARKFA
HDRYGSHKSG IVAFKNAFHG RTLFTVSAGG QPAYSQDFAP LPPDIHHAAY NDINSASALI
DDATCAVIVE PIQGEGGVVP ASNAFLQGLR ELCDRHNALL IFDEVQTGVG RTGELYAYMH
YGVTPDLLTT AKALGGGFPV GALLATEECA SVMTVGTHGT TYGGNPLASA VAGKVLDLIN
TPEMLNGVKQ RHDWFVERLN SINHHYGLFS EVRGLGLLIG CVLNADYAGQ AKQISQEAAK
AGVMVLIAGG NVVRFAPALN VSEEEVTTGL DRFAAACEHF VSRGSS
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