Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_1440 |
Symbol | |
ID | 6146266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 1424988 |
End bp | 1425698 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641616318 |
Product | hypothetical protein |
Protein accession | YP_001743498 |
Protein GI | 170683801 |
COG category | [S] Function unknown |
COG ID | [COG0398] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.212634 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCTG AGCGTAAATT TCTTTTTGCC TGTCTTATTT TTGCGCTGCT CATTTACGCT ATCCACGCTT TCGGTTTATT CGATCTGCTC ACCGATTTAC CTCACTTACA AACACTCATC CGCCAGAGCG GATTGTTCGG TTATAGCCTC TATATTTTGT TATTCATCAT TGCCACCCTC TTTCTGTTAC CAGGAAGCAT ACTGGTGATC GCTGGAGGAA TAGTTTTTGG CCCGTTCTTA GGGACACTAC TCTCATTAAT TGCCGCCACG CTGGCCTCCT CGTGCTCATT CCTGCTGGCG CGCTGGCTGG GGCGTGATTT ACTGCTGAAA TATGTGGGCC ATAGCCATAC TTTTAAGGCC ATTGAAAAAG GCATTGCGCG TAACGGTATT AATTTTCTTA TTCTGACCCG CTTAATCCCG TTGTTTCCTT ACAATATTCA AAATTACGCT TACGGATTAA CCACAATCGC CTTCTGGCCT TATACCCTTA TTTCAGCACT CACGACTCTG CCCGGTATTG TTATTTATAC CGTGATGGCA AGCGATCTCG CCAATGAAGG CATTACGCTG CGCTTTATTT TACAACTCTG TCTGGCGGGC CTGGCGCTGT TTATTCTCGT CCAGCTCGCA AAACTCTACG CCCGACACAA ACATGTGGAT CTGTCTGCTT CTCGCCGCAG CCCACTTACT CACCCAAAAA ATGAAGGATA G
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Protein sequence | MNAERKFLFA CLIFALLIYA IHAFGLFDLL TDLPHLQTLI RQSGLFGYSL YILLFIIATL FLLPGSILVI AGGIVFGPFL GTLLSLIAAT LASSCSFLLA RWLGRDLLLK YVGHSHTFKA IEKGIARNGI NFLILTRLIP LFPYNIQNYA YGLTTIAFWP YTLISALTTL PGIVIYTVMA SDLANEGITL RFILQLCLAG LALFILVQLA KLYARHKHVD LSASRRSPLT HPKNEG
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