Gene EcSMS35_1440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1440 
Symbol 
ID6146266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand- 
Start bp1424988 
End bp1425698 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content47% 
IMG OID641616318 
Producthypothetical protein 
Protein accessionYP_001743498 
Protein GI170683801 
COG category[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.212634 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCTG AGCGTAAATT TCTTTTTGCC TGTCTTATTT TTGCGCTGCT CATTTACGCT 
ATCCACGCTT TCGGTTTATT CGATCTGCTC ACCGATTTAC CTCACTTACA AACACTCATC 
CGCCAGAGCG GATTGTTCGG TTATAGCCTC TATATTTTGT TATTCATCAT TGCCACCCTC 
TTTCTGTTAC CAGGAAGCAT ACTGGTGATC GCTGGAGGAA TAGTTTTTGG CCCGTTCTTA 
GGGACACTAC TCTCATTAAT TGCCGCCACG CTGGCCTCCT CGTGCTCATT CCTGCTGGCG 
CGCTGGCTGG GGCGTGATTT ACTGCTGAAA TATGTGGGCC ATAGCCATAC TTTTAAGGCC 
ATTGAAAAAG GCATTGCGCG TAACGGTATT AATTTTCTTA TTCTGACCCG CTTAATCCCG 
TTGTTTCCTT ACAATATTCA AAATTACGCT TACGGATTAA CCACAATCGC CTTCTGGCCT 
TATACCCTTA TTTCAGCACT CACGACTCTG CCCGGTATTG TTATTTATAC CGTGATGGCA 
AGCGATCTCG CCAATGAAGG CATTACGCTG CGCTTTATTT TACAACTCTG TCTGGCGGGC 
CTGGCGCTGT TTATTCTCGT CCAGCTCGCA AAACTCTACG CCCGACACAA ACATGTGGAT 
CTGTCTGCTT CTCGCCGCAG CCCACTTACT CACCCAAAAA ATGAAGGATA G
 
Protein sequence
MNAERKFLFA CLIFALLIYA IHAFGLFDLL TDLPHLQTLI RQSGLFGYSL YILLFIIATL 
FLLPGSILVI AGGIVFGPFL GTLLSLIAAT LASSCSFLLA RWLGRDLLLK YVGHSHTFKA 
IEKGIARNGI NFLILTRLIP LFPYNIQNYA YGLTTIAFWP YTLISALTTL PGIVIYTVMA 
SDLANEGITL RFILQLCLAG LALFILVQLA KLYARHKHVD LSASRRSPLT HPKNEG