| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1432 |
|---|
| Symbol | |
|---|
| ID | 6143823 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 1417696 |
|---|
| End bp | 1418316 |
|---|
| Gene Length | 621 bp |
|---|
| Protein Length | 206 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641616310 |
|---|
| Product | CDP-alcohol phosphatidyltransferase family protein |
|---|
| Protein accession | YP_001743490 |
|---|
| Protein GI | 170684299 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0558] Phosphatidylglycerophosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.437353 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTAGACC GCCATCTTCA TCCCCGGATT AAACCGTTGT TGCATCAGTG CGTGCGGGTT
CTTGATAAAC CGGGCATTAC GCCAGATGGT TTAACATTAG TGGGATTTGC CATCGGCGTG
CTGGCACTGC CTTTTCTGGC GCTGGGCTGG TATCTGGCGG CGCTAGTCGC CATTTTGTTG
AACAGGCTGC TTGATGGTCT GGACGGTGCG CTGGCGCGGC GCAGAGGGCT TACCGACGCG
GGCGGCTTTC TCGATATTTC TCTCGATTTT CTCTTTTACG CGCTGGTGCC GTTTGGTTTT
ATTCTTGCTG CACCGGAGCA AAATGCGCTG GCAGGCGGCT GGCTGCTGTT TGCGTTTATC
GGCACGGGCA GCAGTTTTCT CGCTTTTGCT GCGCTGGCGG CGAAACATCA GATTGATAAT
CCTGGTTATG CGCATAAATC GTTTTATTAT CTGGGCGGGT TAACCGAAGG CAGCGAGACG
ATTTTGCTGT TTGTTCTGAG TTGCCTCTTT CCGGCCTGTT TTCCGTGGTT TGCGTGGGTA
TTTGGTGCGT TGTGCTGGAT GACGACCTTT ACGCGGGTGT GGAGTGGGTA TCTGACGCTG
AAGTCGCTCC AGCGTCAGTA A
|
|---|
| Protein sequence | MLDRHLHPRI KPLLHQCVRV LDKPGITPDG LTLVGFAIGV LALPFLALGW YLAALVAILL
NRLLDGLDGA LARRRGLTDA GGFLDISLDF LFYALVPFGF ILAAPEQNAL AGGWLLFAFI
GTGSSFLAFA ALAAKHQIDN PGYAHKSFYY LGGLTEGSET ILLFVLSCLF PACFPWFAWV
FGALCWMTTF TRVWSGYLTL KSLQRQ
|
|---|
| |