| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1429 |
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| Symbol | gdhA |
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| ID | 6147058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 1415385 |
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| End bp | 1416728 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641616307 |
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| Product | glutamate dehydrogenase |
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| Protein accession | YP_001743487 |
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| Protein GI | 170681354 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0334] Glutamate dehydrogenase/leucine dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00746713 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCAGA CATATTCTCT GGAGTCATTC CTCAACCATG TCCAAAAGCG CGACCCGAAT
CAAACCGAGT TCGCGCAAGC CGTTCGTGAA GTAATGACCA CACTCTGGCC TTTTCTTGAA
CAAAATCCAA AATATCGCCA GATGTCATTA CTGGAGCGTC TGGTTGAACC GGAGCGCGTG
ATCCAGTTTC GCGTGGTATG GGTTGATGAT CGCAACCAGG TACAGGTCAA CCGTGCATGG
CGTGTGCAGT TCAGTTCTGC CATCGGCCCG TACAAAGGCG GTATGCGCTT CCATCCGTCA
GTTAACCTTT CCATTCTCAA ATTCCTCGGC TTCGAACAAA CCTTCAAAAA TGCCCTGACT
ACTCTGCCGA TGGGCGGTGG TAAAGGCGGC AGCGATTTCG ATCCGAAAGG AAAAAGCGAA
GGTGAAGTGA TGCGTTTTTG CCAGGCGCTG ATGACTGAAC TGTATCGCCA CCTGGGCGCG
GATACCGACG TTCCGGCAGG TGATATCGGG GTTGGTGGTC GTGAAGTCGG CTTTATGGCG
GGGATGATGA AAAAGCTCTC CAACAATACC GCCTGCGTCT TCACCGGTAA GGGCCTTTCA
TTTGGCGGCA GTCTTATTCG CCCGGAAGCT ACCGGATACG GTCTGGTTTA TTTCACAGAA
GCAATGCTAA AACGCCACGG TATGGGTTTT GAAGGAATGC GCGTTTCCGT TTCTGGCTCC
GGCAACGTCG CCCAGTACGC TATCGAAAAA GCGATGGAAT TTGGTGCTCG TGTGATCACT
GCGTCAGACT CCAGTGGCAC TGTAGTTGAT GAAAGCGGAT TCACGAAAGA GAAACTGGCA
CGTCTTATCG AAATCAAAGC CAGCCGCGAT GGTCGAGTGG CAGATTACGC CAAAGAATTT
GGTCTGGTCT ATCTCGAAGG CCAACAACCG TGGTCTGTAC CGGTTGATAT CGCCCTGCCT
TGCGCCACCC AGAACGAACT GGATGTTGAC GCCGCGCATC AGCTTATCGC CAATGGCGTT
AAAGCCGTCG CCGAAGGGGC AAATATGCCG ACCACCATCG AAGCGACTGA ACTGTTCCAA
CAGGCAGGCG TACTGTTTGC ACCGGGTAAA GCGGCTAATG CTGGCGGTGT AGCAACATCG
GGCCTGGAAA TGGCGCAAAA CGCTGCGCGC CTGGGCTGGA AAGCCGAGAA AGTTGACGCA
CGTTTGCATC ACATCATGCT GGATATCCAC CATGCCTGTG TTGAGCATGG TGGTGAAGGT
GAGCAAACCA ACTACGTGCA GGGCGCGAAC ATTGCCGGTT TTGTGAAGGT TGCGGATGCG
ATGTTAAGCC AGGGCGTGAT TTAA
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| Protein sequence | MDQTYSLESF LNHVQKRDPN QTEFAQAVRE VMTTLWPFLE QNPKYRQMSL LERLVEPERV
IQFRVVWVDD RNQVQVNRAW RVQFSSAIGP YKGGMRFHPS VNLSILKFLG FEQTFKNALT
TLPMGGGKGG SDFDPKGKSE GEVMRFCQAL MTELYRHLGA DTDVPAGDIG VGGREVGFMA
GMMKKLSNNT ACVFTGKGLS FGGSLIRPEA TGYGLVYFTE AMLKRHGMGF EGMRVSVSGS
GNVAQYAIEK AMEFGARVIT ASDSSGTVVD ESGFTKEKLA RLIEIKASRD GRVADYAKEF
GLVYLEGQQP WSVPVDIALP CATQNELDVD AAHQLIANGV KAVAEGANMP TTIEATELFQ
QAGVLFAPGK AANAGGVATS GLEMAQNAAR LGWKAEKVDA RLHHIMLDIH HACVEHGGEG
EQTNYVQGAN IAGFVKVADA MLSQGVI
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