| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1427 |
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| Symbol | selD |
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| ID | 6146419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1412305 |
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| End bp | 1413348 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641616305 |
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| Product | selenophosphate synthetase |
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| Protein accession | YP_001743485 |
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| Protein GI | 170681972 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0709] Selenophosphate synthase |
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| TIGRFAM ID | [TIGR00476] selenium donor protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000127521 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.773319 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGA ACTCGATTCG TTTGACCCAA TACAGCCACG GCGCTGGTTG CGGCTGTAAA
ATTTCCCCAA AAGTGTTGGA AACCATCCTG CACAGTGAGC AGGCGAAGTT TGTTGATCCG
AATTTGCTTG TGGGTAATGA AACCCGCGAC GATGCGGCGG TGTACGATCT GGGCAATGGC
ACCAGCGTTA TCAGTACCAC CGACTTCTTT ATGCCGATCG TTGATAATCC TTTCGATTTT
GGCCGCATTG CGGCGACTAA CGCCATCAGC GATATCTTCG CAATGGGCGG CAAACCGATT
ATGGCGATTG CGATCCTCGG CTGGCCGATT AACAAACTTT CCCCGGAAAT TGCCCGCGAA
GTGACCGAAG GTGGACGCTA TGCATGCCGT CAGGCGGGTA TTGCGCTGGC TGGCGGTCAC
TCCATCGATG CGCCGGAGCC GATTTTTGGT CTGGCGGTAA CGGGGATCGT ACCGACCGAG
CGGGTGAAGA AAAACAGTAC CGCACAAGCC GGATGCAAAC TGTTCCTGAC GAAACCGCTG
GGGATTGGCG TTCTTACCAC GGCTGAGAAA AAATCACTGC TTAAACCAGA ACATCAGGGA
TTGGCGACGG AAGTGATGTG CCGGATGAAC ATCGCAGGCG CGTCCTTTGC CAACATCGAA
GGCGTAAAAG CGATGACAGA CGTTACGGGT TTTGGTTTGC TGGGGCATTT AAGCGAAATG
TGTCAGGGCG CAGGTGTGCA GGCGCGCGTC GACTATGACG CGATCCCGAA ATTGCCTGGG
GTTGAAGAGT ACATTAAGTT GGGCGCAGTG CCTGGCGGCA CCGAACGTAA CTTTGCCAGC
TACGGTCATC TGATGGGTGA AATGCCGCGT GAAGTGCGCG ATCTGCTGTG CGATCCGCAA
ACTTCTGGCG GTTTGCTGCT GGCGGTCATT CCGGAAGCAG AAAATGAGGT CAAAGCTACA
GCCGCCGAGT TTGGCATTGA ACTGACGGCG ATTGGCGAAC TGGTGCCAGC GCGCGGCGGT
CGTGCCATGG TTGAGATCCG TTAA
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| Protein sequence | MSENSIRLTQ YSHGAGCGCK ISPKVLETIL HSEQAKFVDP NLLVGNETRD DAAVYDLGNG
TSVISTTDFF MPIVDNPFDF GRIAATNAIS DIFAMGGKPI MAIAILGWPI NKLSPEIARE
VTEGGRYACR QAGIALAGGH SIDAPEPIFG LAVTGIVPTE RVKKNSTAQA GCKLFLTKPL
GIGVLTTAEK KSLLKPEHQG LATEVMCRMN IAGASFANIE GVKAMTDVTG FGLLGHLSEM
CQGAGVQARV DYDAIPKLPG VEEYIKLGAV PGGTERNFAS YGHLMGEMPR EVRDLLCDPQ
TSGGLLLAVI PEAENEVKAT AAEFGIELTA IGELVPARGG RAMVEIR
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