Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_1422 |
Symbol | ydjE |
ID | 6144689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 1406334 |
End bp | 1407692 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641616300 |
Product | major facilitator family transporter |
Protein accession | YP_001743480 |
Protein GI | 170683543 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.452173 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACAAT ATGATCAAAT TGGCGCAAGA CTGGACCGCT TGCCTTTGGC CCGGTTTCAT TATCGTATAT TTGGTATTAT AAGCTTTAGT CTGTTATTAA CGGGTTTTTT GAGTTATTCA GGCAATGTTG TTTTAGCAAA GCTGGTAAGC AATGGATGGT CAAATAATTT CCTCAATGCC GCCTTTACCT CGGCATTAAT GTTTGGTTAT TTCATCGGCT CTCTTACCGG TGGGTTCATC GGTGATTATT TTGGGCGGCG CAGGGCTTTT CGCATAAATC TTCTCATCGT CGGTATTGCG GCAACAGGGG CCGCTTTTGT CCCTGATATG TACTGGCTCA TCTTCTTTCG CTTCCTGATG GGCACAGGAA TGGGGGCGCT GATTATGGTT GGCTATGCCT CATTTACGGA GTTTATCCCC GCGACGGTGC GTGGAAAATG GTCCGCGCGG CTCTCATTTG TTGGTAACTG GTCGCCCATG CTGTCTGCGG CGATAGGCGT GGTGGTTATC GCTTTTTTTA GTTGGCGGAT AATGTTTCTG CTGGGCGGTA TTGGCATACT GTTAGCCTGG TTTCTCTCAG GTAAATACTT TATTGAGTCG CCACGATGGC TGGCAGGGAA AGGGCAAATC GCAGGTGCAG AAAGCCAACT TCGTGAAGTA GAGCAGCAAA TTGAAAGAGA GAAGAGTATT CGTTTACCCC CGCTTACTTT GAACCAGAGC AACAGCAAGG TTAAGGTAAT CAAGGGTACC TTCTGGCTCC TGTTTAAAGG GGAAATGTTA CGACGTACAT TAGTCGCGAT TACTGTGTTA ATTGCAATGA ACATTTCGCT TTATACCATC ACCGTATGGA TACCGACCAT ATTTGTTAAC TCCGGCATTG ATGTTGATAA ATCAATATTA ATGACCGCTG TTATTATGAT TGGCGCTCCG GTAGGGATAT TTATTGCGGC ATTAATTATT GATCATTTTC CTCGTCGATT ATTTGGCTCT GCCTTACTTA TTATTATTGC TGTGTTAGGC TATATCTATT CAATTCAAAC TACAGAGTGG GCGATTTTAA TCTATGGCCT GGTGATGATC TTCTTTTTAT ACATGTATGT GTGCTTCGCG TCGGCGGTTT ATATCCCGGA ACTTTGGCCA ACGCATTTAC GCCTGCGTGG TTCGGGTTTC GTTAATGCCG TCGGACGGAT CGTCGCAGTC TTCACGCCCT ATGGCGTTGC GGCATTATTA ACACATTATG GGTCGATTAC GGTGTTTATG GTGCTTGGTG TCATGTTAGT GCTCTGTGCG CTGGTTCTCT CCATTTTTGG CATCGAAACG CGGAAGGTGT CGCTGGAAGA GATTTCTGAG GTGAATTAA
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Protein sequence | MEQYDQIGAR LDRLPLARFH YRIFGIISFS LLLTGFLSYS GNVVLAKLVS NGWSNNFLNA AFTSALMFGY FIGSLTGGFI GDYFGRRRAF RINLLIVGIA ATGAAFVPDM YWLIFFRFLM GTGMGALIMV GYASFTEFIP ATVRGKWSAR LSFVGNWSPM LSAAIGVVVI AFFSWRIMFL LGGIGILLAW FLSGKYFIES PRWLAGKGQI AGAESQLREV EQQIEREKSI RLPPLTLNQS NSKVKVIKGT FWLLFKGEML RRTLVAITVL IAMNISLYTI TVWIPTIFVN SGIDVDKSIL MTAVIMIGAP VGIFIAALII DHFPRRLFGS ALLIIIAVLG YIYSIQTTEW AILIYGLVMI FFLYMYVCFA SAVYIPELWP THLRLRGSGF VNAVGRIVAV FTPYGVAALL THYGSITVFM VLGVMLVLCA LVLSIFGIET RKVSLEEISE VN
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