Gene EcSMS35_1417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1417 
SymbolgutB 
ID6142812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1401480 
End bp1402523 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content47% 
IMG OID641616295 
Productsorbitol dehydrogenase 
Protein accessionYP_001743475 
Protein GI170684066 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATT CAAAAGCAAT ATTGCAGGTG CCGGGCACAA TGAAAATTAT TTCAGCAGAA 
ATGCCTGTGC CTAAAGAAGA TGAAGTTTTG ATTAAAGTAG AATATGTCGG TATTTGTGGT
TCAGATGTAC ATGGTTTTGA ATCAGGCCCG TTTATTCCGC CTAAAGACCC AAATCAAGAA
ATTGGCCTGG GTCATGAATG CGCCGGGACG GTTGTGGCTG TGGGAAGCCG CGTGCGCAAA
TTTAAACCGG GGGATCGGGT AAATATCGAA CCTGGCGTTC CTTGCGGTCA CTGTCGTTAC
TGTCTGGAAG GCAAATATAA CATTTGCCCG GACGTTGATT TTATGGCGAC ACAACCCAAC
TACCGCGGCG CATTAACGCA CTATCTGTGT CATCCGGAGA GCTTTACTTA CAAACTGCCA
GACAATATGG ACACGATGGA AGGGGCGCTG GTGGAGCCTG CCGCAGTCGG GATGCATGCC
GCGATGCTGG CAGATGTTAA ACCGGGTAAG AAGATAATTA TTCTGGGAGC AGGTTGTATT
GGTTTGATGA CGTTGCAAGC GTGCAAATGC CTGGGAGCTA CGGATATTGC CGTCGTTGAT
GTGCTGGAAA AACGTCTGAC AATGGCGGAA CAGCTCGGCG CGACAGTGGT TATTAACGGC
GCAAAAGAAG ACACTATTGC ACGCTGTCAG CAATTTACCG AAGAAATGGG CGCAGATATT
GTTTTCGAAA CAGCAGGTTC TGCGGTCACC GTTAAACAGG CACCTTATCT GGTAATGCGC
GGCGGTAAAA TTATGATTGT TGGTACTGTA CCGGGCGATT CGGCAATCAA TTTCCTCAAA
ATCAATCGCG AAGTCACTAT CCAGACGGTA TTCCGCTATG CCAATCGTTA TCCGGTCACG
ATTGAAGCTA TTTCTTCAGG GCGATTCGAT GTGAAATCGA TGGTGACGCA TATTTACGAT
TATCGGGATG TACAACAGGC ATTTGAAGAG TCAGTTAACA ACAAACGCGA CATTATTAAA
GGCGTTATTA AAATTAGCGA TTAA
 
Protein sequence
MKNSKAILQV PGTMKIISAE MPVPKEDEVL IKVEYVGICG SDVHGFESGP FIPPKDPNQE 
IGLGHECAGT VVAVGSRVRK FKPGDRVNIE PGVPCGHCRY CLEGKYNICP DVDFMATQPN
YRGALTHYLC HPESFTYKLP DNMDTMEGAL VEPAAVGMHA AMLADVKPGK KIIILGAGCI
GLMTLQACKC LGATDIAVVD VLEKRLTMAE QLGATVVING AKEDTIARCQ QFTEEMGADI
VFETAGSAVT VKQAPYLVMR GGKIMIVGTV PGDSAINFLK INREVTIQTV FRYANRYPVT
IEAISSGRFD VKSMVTHIYD YRDVQQAFEE SVNNKRDIIK GVIKISD