Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_1416 |
Symbol | ydjK |
ID | 6143322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 1400084 |
End bp | 1401463 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641616294 |
Product | major facilitator family transporter |
Protein accession | YP_001743474 |
Protein GI | 170683522 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.888006 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACAGA TAACAAAACC GCATTGTGGT GCTCGGCTGG ATCGCTTACC GGATTGCCGC TGGCATTCGT CAATGTTTGC TATCGTCGCG TTTGGCTTGC TTGTCTGCTG GAGTAATGCC GTTGGTGGCT TGATCCTCGC GCAGCTGAAA GCGTTGGGCT GGACAGATAA TTCCACCACT GCCACATTCT CAGCAATCAC GACCGCCGGA ATGTTTCTCG GTGCGCTGGT TGGCGGCATC ATCGGTGACA AAACCGGTCG CAGAAATGCG TTCATCCTCT ATGAGGCCAT TCATATTGCC TCGATGGTGG TCGGTGCTTT TTCACCGAAT ATGGATTTCC TTATTGCCTG CCGTTTTGTG ATGGGCGTTG GGCTGGGAGC TTTACTGGTG ACGCTGTTTG CTGGTTTCAC CGAATATATG CCCGGTAGAA ATCGCGGAAC GTGGTCCAGT CGGGTTTCTT TTATTGGCAA CTGGTCATAT CCGCTCTGTT CATTGATTGC GATGGGACTC ACGCCGCTGA TTAGTGCAGA GTGGAACTGG CGAGTACAAC TGCTTATCCC TGCAATATTG TCGCTTATCG CTACGGCGCT GGCCTGGCGC TACTTTCCTG AATCCCCGCG CTGGCTGGAA TCGCGCGGAC GGTATCAGGA AGCCGAGAAA GTCATGCGGA GTATAGAAGA AGGCGTCATA CGCCAGACGG GAAAACCTTT GCCGCCCGTG GTTATTGCTG ATGACGGTAA AGCGCCACAA GCGGTGCCGT ATTCAGCCTT ACTGACAGGA GTATTACTGA AACGCGTGAT ATTAGGTTCT TGTGTGCTGA TTGCCATGAA CGTTGTGCAG TACACACTAA TTAACTGGTT GCCAACAATA TTCATGACCC AGGGGATTAA TTTAAAAGAC TCGATTGTTT TAAATACCAT GAGTATGTTT GGTGCGCCAT TTGGTATATT TATTGCCATG CTGGTGATGG ATAAAATTCC GCGTAAAACA ATGGGTGTGG GGCTATTAAT CCTGATTGCG GTGCTCGGAT ATATCTATTC ACTGCAAACC AGTATGTTGC TCATAACGCT GATTGGTTTC TTCCTGATTA CTTTCGTCTA TATGTACGTT TGCTATGCCT CGGCAGTGTA TGTCCCTGAG ATCTGGCCGA CAGAGGCAAA ATTACGTGGC TCCGGTCTGG CGAATGCAGT AGGGCGAATC AGTGGTATTG CCGCACCTTA TGCCGTTGCA GTGCTGCTCA GTAGTTATGG CGTAACGGGA GTCTTTATTC TTCTGGGGGC GGTTTCAATT ATTGTCGCAA TTGCTATCGC CACCATTGGA ATTGAAACCA AAGGTGTCTC CGTTGAAAGT TTAAGTATTG ATGCAGTAGT CAATAAATAA
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Protein sequence | MEQITKPHCG ARLDRLPDCR WHSSMFAIVA FGLLVCWSNA VGGLILAQLK ALGWTDNSTT ATFSAITTAG MFLGALVGGI IGDKTGRRNA FILYEAIHIA SMVVGAFSPN MDFLIACRFV MGVGLGALLV TLFAGFTEYM PGRNRGTWSS RVSFIGNWSY PLCSLIAMGL TPLISAEWNW RVQLLIPAIL SLIATALAWR YFPESPRWLE SRGRYQEAEK VMRSIEEGVI RQTGKPLPPV VIADDGKAPQ AVPYSALLTG VLLKRVILGS CVLIAMNVVQ YTLINWLPTI FMTQGINLKD SIVLNTMSMF GAPFGIFIAM LVMDKIPRKT MGVGLLILIA VLGYIYSLQT SMLLITLIGF FLITFVYMYV CYASAVYVPE IWPTEAKLRG SGLANAVGRI SGIAAPYAVA VLLSSYGVTG VFILLGAVSI IVAIAIATIG IETKGVSVES LSIDAVVNK
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