| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1415 |
|---|
| Symbol | |
|---|
| ID | 6142784 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 1398981 |
|---|
| End bp | 1400057 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641616293 |
|---|
| Product | zinc-binding dehydrogenase family oxidoreductase |
|---|
| Protein accession | YP_001743473 |
|---|
| Protein GI | 170684023 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.297309 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCAC TGGCTCGGTT TGGCAAAGCC TTTGGCGGCT ACAAGATGAT CGATGTGCCA
CAACCCATTT GTGGCCCGGA AGATGTCGTG ATTGAAATTA AAGCCGCGGC AATCTGCGGC
GCAGACATGA AGCACTACAA TGTCGATAGC GGTTCTGATG AGTTTAACTC TATCCGCGGC
CATGAGTTCG CAGGTTGTAT TGCGCAGGTT GGTGAAAAAG TCAAAGACTG GAAAGTGGGG
CAACGCGTCG TGTCAGATAA CAGCGGTCAC GTCTGCGGCG TTTGTCCGGC CTGTGAACAA
GGTGATTTTC TGTGTTGTAC AGAAAAAGTA AACCTTGGTC TGGATAACAA TACCTGGGGC
GGTGGTTTTT CCAAATATTG TCTGGTTCCT GGTGAAATTC TCAAAATTCA TCGTCATGCG
TTGTGGGAAA TCCCTGATGG TGTTGATTAT GAGGACGCAG CCGTACTTGA CCCTATCTGC
AATGCCTACA AATCCATCGC GCAGCAATCG AAATTCCTCC CTGGTCAGGA TGTAGTCGTC
ATCGGCACTG GCCCACTCGG ACTGTTCTCC GTACAAATGG CGCGGATTAT GGGGGCGGTA
AATATCGTCG TCGTTGGTCT ACAAGAAGAT GTGGCGGTCC GCTTCCCGGT TGCAAAAGAA
CTGGGTGCGA CGGCAGTAGT AAATGGTTCT ACCGAAGATG TGGTGGCACG CTGCCAGCAA
ATTTGTGGCA AAGACAATCT GGGGCTGGTG ATTGAATGCT CCGGTGCCAA TATCGCATTG
AAACAAGCCA TCGAAATGCT CCGCCCGAAT GGGGAAGTGG TACGCGTTGG AATGGGCTTC
AAACCTCTTG ATTTCTCGAT TAATGACATT ACCGCCTGGA ACAAAAGCAT CATTGGGCAT
ATGGCCTATG ACTCCACCTC ATGGCGTAAC GCTATCAGGC TATTAGCCAG CGGCGCTATC
AAAGTCAAAC CGATGATCAC GCATCGTATC GGCCTGTCGC AATGGCGCGA AGGGTTTGAT
GCGATGGTCG ATAAAACCGC AATCAAAGTG ATCATGACTT ACGACTTTGA TGAATAA
|
|---|
| Protein sequence | MKALARFGKA FGGYKMIDVP QPICGPEDVV IEIKAAAICG ADMKHYNVDS GSDEFNSIRG
HEFAGCIAQV GEKVKDWKVG QRVVSDNSGH VCGVCPACEQ GDFLCCTEKV NLGLDNNTWG
GGFSKYCLVP GEILKIHRHA LWEIPDGVDY EDAAVLDPIC NAYKSIAQQS KFLPGQDVVV
IGTGPLGLFS VQMARIMGAV NIVVVGLQED VAVRFPVAKE LGATAVVNGS TEDVVARCQQ
ICGKDNLGLV IECSGANIAL KQAIEMLRPN GEVVRVGMGF KPLDFSINDI TAWNKSIIGH
MAYDSTSWRN AIRLLASGAI KVKPMITHRI GLSQWREGFD AMVDKTAIKV IMTYDFDE
|
|---|
| |