Gene EcSMS35_1407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1407 
Symbol 
ID6144521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1390072 
End bp1391355 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content49% 
IMG OID641616285 
Producthypothetical protein 
Protein accessionYP_001743465 
Protein GI170679771 
COG category[S] Function unknown 
COG ID[COG2718] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.955409 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTGGT TTATTGACCG GCGTCTGAAC GGCAAAAACA AAAGCATGGT GAATCGCCAG 
CGTTTTTTAC GCCGTTATAA AGCGCAAATT AAACAGTCGA TCTCCGAGGC CATTAATAAG
CGTTCGGTGA CTGACGTCGA CAGCGGCGAG TCCGTATCCA TTCCCACGGA AGATATTAGC
GAACCGATGT TTCATCAGGG GCGTGGCGGT CTGCGCCACC GCGTGCATCC GGGCAATGAC
CATTTCGTCC AGAACGACCG AATTGAACGT CCCCAGGGTG GCGGCGGAGG TTCCGGCAGT
GGTCAGGGCC AGGCCAGCCA GGATGGTGAA GGTCAGGATG AATTTGTCTT TCAGATTTCG
AAAGATGAGT ATCTTGATCT GCTCTTTGAA GATCTGGCCT TACCGAATCT GAAACAAAAC
CAACAACGCC AGCTGACCGA ATATAAAACG CATCGTGCGG GTTATACCGC TAACGGCGTT
CCGGCCAATA TCAGCGTTGT GCGTTCATTG CAGAACTCAC TGGCACGACG CACAGCCATG
ACGGCGGGCA AGCGGCGGGA ACTTCATGCG CTGGAAGAGC ATTTGGCCAT CATCAGCAAC
AGTGAACCTG CGCAACTGCT GGAAGAGGAA CGTCTGCGCA AAGAAATTGC AGAATTACGT
GCCAAAATTG AACGCGTCCC TTTCATTGAC ACCTTCGATT TACGTTACAA GAACTACGAA
AAACGGCCCG ATCCCTCCAG CCAGGCAGTG ATGTTTTGCC TGATGGACGT TTCGGGTTCA
ATGGATCAGT CCACTAAAGA TATGGCTAAG CGTTTTTATA TTCTGCTGTA TCTGTTCCTT
AGCAGAACGT ATAAGAACGT GGAAGTCGTT TACATCCGCC ACCATACTCA GGCGAAAGAA
GTCGATGAAC ATGAGTTTTT CTACTCGCAG GAAACTGGCG GCACCATTGT TTCCAGCGCC
CTGAAACTGA TGGATGAGGT AGTGAAAGAG CGTTATAACC CGGCACAGTG GAATATTTAC
GCAGCCCAAG CATCAGACGG CGATAACTGG GCCGATGACT CTCCGCTTTG CCATGAAATT
CTGGCGAAAA AAATATTACC CGTCGTTCGT TATTACAGCT ATATCGAAAT TACACGTCGC
GCGCATCAGA CACTGTGGCG AGAATATGAG CATCTGCAAT CTACTTTCGA CAACTTTGCG
ATGCAGCATA TCCGCGACCA GGATGATATT TATCCGGTGT TCCGTGAACT GTTTCATAAA
CAAAATGCAA CAGCTAAAGA CTAA
 
Protein sequence
MTWFIDRRLN GKNKSMVNRQ RFLRRYKAQI KQSISEAINK RSVTDVDSGE SVSIPTEDIS 
EPMFHQGRGG LRHRVHPGND HFVQNDRIER PQGGGGGSGS GQGQASQDGE GQDEFVFQIS
KDEYLDLLFE DLALPNLKQN QQRQLTEYKT HRAGYTANGV PANISVVRSL QNSLARRTAM
TAGKRRELHA LEEHLAIISN SEPAQLLEEE RLRKEIAELR AKIERVPFID TFDLRYKNYE
KRPDPSSQAV MFCLMDVSGS MDQSTKDMAK RFYILLYLFL SRTYKNVEVV YIRHHTQAKE
VDEHEFFYSQ ETGGTIVSSA LKLMDEVVKE RYNPAQWNIY AAQASDGDNW ADDSPLCHEI
LAKKILPVVR YYSYIEITRR AHQTLWREYE HLQSTFDNFA MQHIRDQDDI YPVFRELFHK
QNATAKD