| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1406 |
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| Symbol | |
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| ID | 6142786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 1388450 |
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| End bp | 1389784 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641616284 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001743464 |
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| Protein GI | 170680353 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTACAC AAAAATTAAA AGCTCAAGGC TTTTTTGTTT TCAGCTTATT GCTGACGTTA
ATTTTATTTT GCATTACTAC TTTATATAAC GAAAACACGA ATGTAAAACT CATCCCACAG
ATGAATTACC TGATGGTTGT TGTGGCTTTG TTTTTCCTTA ACGCCGTCAT TTTTCTTTTC
ATGTTAATGA AGTATTTCAC TAACAAACAA ATTTTACCAA CACTCATTTT AAGCCTTGCA
TTTTTAAGTG GCCTTATCTA TTTAGTTGAA ACCATTGTAA TTATCCATAA ACCAATCAAC
GGCAGTACAC TGATCCAGAC AAAGTCGAAT GATGTTTCTA TTTTCTATAT TTTCCGCCAA
CTCAGTTTCA TTTGTTTAAC CTCGCTGGCG CTCTTTTGTT ATGGGAAAGA CAACATCCTT
GACAACAATA AGAAAAAAAC TGGCATTCTG TTGCTGGCGC TGATTCCTTT TTTAGTTTTT
CCCCTTCTGG CACACAATCT GAGTAGTTAT AACGCTGACT ATTCTTTGTA TGTCGTCGAT
TACTGTCCGG ACAACCATAC TGCGACCTGG GGAATCAACT ATACAAAAAT ATTGGTTTGT
TTGTGGGCAT TTTTACTGTT CTTTATTATC ATGCGTACAC GATTAGCCAG CGAACTATGG
CCGTTAATAG CATTATTATG TCTGGCATCG CTATGCTGCA ACTTACTTCT ACTGACTCTG
GATGAGTATA ATTACACCAT CTGGTATATC AGTCGCGGGA TTGAAGTTTC CAGTAAACTG
TTTGTTGTGT CTTTTCTGAT TTATAACATT TTTCAGGAAC TGCAACTCTC CAGCAAACTG
GCAGTTCATG ATGTGCTGAC CAATATTTAT AATCGGCGCT ACTTTTTCAA CAGCGTAGAG
TCATTATTGT CGCGACCTGT TGTTAAGGAC TTTTGTGTCA TGCTGGTTGA TATTAATCAG
TTCAAACGCA TCAATGCCCA ATGGGGACAT CGTGTGGGTG ATAAAGTGCT GGTATCAATT
GTCGATATTA TCCAGCAAAG CATCCGCCCC GATGATATTT TAGCGCGACT GGAGGGTGAG
GTGTTTGGCT TGCTATTTAC CGAACTCAAT AGTGCCCAGG CAAAAATCAT TGCGGAACGT
ATGCGTAAAA ATGTCGAACT CCTGACCGGC TTTAGTAACA GATATGATGT TCCTGAACAA
ATGACCATCA GTATTGGCAC GGTTTTTTCA ACGGGTGACA CGCATAATAT CTCGCTTGTC
ATGACGGAAG CAGATAAAGC CTTACGCGAA GCGAAAAGCG AGGGGGGCAA CAAAGTGATT
ATTCATCATA TTTAA
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| Protein sequence | MGTQKLKAQG FFVFSLLLTL ILFCITTLYN ENTNVKLIPQ MNYLMVVVAL FFLNAVIFLF
MLMKYFTNKQ ILPTLILSLA FLSGLIYLVE TIVIIHKPIN GSTLIQTKSN DVSIFYIFRQ
LSFICLTSLA LFCYGKDNIL DNNKKKTGIL LLALIPFLVF PLLAHNLSSY NADYSLYVVD
YCPDNHTATW GINYTKILVC LWAFLLFFII MRTRLASELW PLIALLCLAS LCCNLLLLTL
DEYNYTIWYI SRGIEVSSKL FVVSFLIYNI FQELQLSSKL AVHDVLTNIY NRRYFFNSVE
SLLSRPVVKD FCVMLVDINQ FKRINAQWGH RVGDKVLVSI VDIIQQSIRP DDILARLEGE
VFGLLFTELN SAQAKIIAER MRKNVELLTG FSNRYDVPEQ MTISIGTVFS TGDTHNISLV
MTEADKALRE AKSEGGNKVI IHHI
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