| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1405 |
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| Symbol | |
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| ID | 6143368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 1386779 |
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| End bp | 1388269 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641616283 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001743463 |
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| Protein GI | 170683497 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.856707 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTGC ACCATAGAAT GCTCCGGCAT TTTATCGCCG CAAGTGTCAT TGTGCTGACA
TCTTCCTTCC TTATTTTTGA ACTTGTCGCC AGTGACAGAG CAATGAGTGC CTATCTGCGC
TATATCGTGC AGAGAGCAGA CTCCTCCTTT CTTTATGATA AGTATCAGAA TCAGAGTATT
GCCGCGCATG TGATGCGCGC TCTCGCTGCT GAGCAGTCGG AAGTGTCGCC AGAACAGCGG
CGAGCCATCT GCGAGGCTTT TGAGTCTGCC AATAATACCC ATGGCTTAAA CCTGACTGCC
CATAAATACC CTGGCTTACG CGGCACACTA CAAACCGCAT CCACTGACTG CGACACAATT
GTGGAAGCTG CTGCACTATT ACCCGCTTTT GATCAGGCAG TGGAAGGCAA CCGCCACCAG
GATGATTACG GTTCAGGTCT TGGGATGGCC GAAGAGAAAT TTCACTATTA TCTCGATCTC
AATGACCGCT ATGTCTATTT TTATGAGCCG GTTAATGTTG AGTACTTTGC GATGAATAAC
TGGTCCTTCC TGCAGTCAGG AAGTATTGGC ATCGATCGCA AAGATATTGA AAAGGTATTT
ACCGGGCGTA CCGTATTATC GAGCATTTAC CAGGATCAGC GTACTAAACA GAACGTGATG
AGTTTGCTGA CGCCGGTATA TGTCGCAGGG CAGCTAAAAG GGATTGTGCT GCTGGATATT
AACAAAAACA ATCTGCGGAA TATCTTTTAC ACTCATGACC GCCCTCTCCT CTGGCGTTTT
CTCAATGTCA CGCTAACTGA TACCGATTCG GGGCGCGACA TTATCATCAA CCAGAGCGAA
GATAATCTGT TCCAGTATGT CAGTTACGTC CATGACTTAC CGGGCGGCAT TCGTGTCTCG
TTATCCATTG ATATTCTTTA CTTTATCACG TCTTCGTGGA AAAGCGTTCT GTTCTGGATT
TTGACGGCGT TAATTTTGCT GAATATGGTG CGGATGCACT TCCGTTTATA CCAAAATGTG
TCGCGAGAAA ATATTAGTGA TGCGATGACT GGACTCTATA ATCGCAAAAT TTTAACCCCT
GAACTGGAGC AGCGGTTGCA GAAACTGGTG CAATCCGGTT CTTCGGTGAT GTTTATTGCA
ATTGACATGG ACAAGTTAAA GCAAATAAAT GACACCCTTG GTCATCAGGA GGGGGATTTA
GCGATTACGT TATTAGCTCA GGCGATTAAA CAATCGATTC GTAAAAGTGA TTATGCCATC
CGACTCGGTG GCGATGAATT CTGCATCATT CTTGTCGATT CGACACCGCA AATTGCAGCA
CAACTGCCTG AACGTATCGA AAAACGTCTG CAACATATCG CGCCGCAGAA AGAGATCGGC
TTCTCTTCCG GTATTTACGC GATGAAAGAA AACGATACGT TACATGATGC GTATAAAGCT
TCCGATGAGC GTTTATATGT CAATAAGCAG AACAAAAACA GCCGTTCATG A
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| Protein sequence | MKLHHRMLRH FIAASVIVLT SSFLIFELVA SDRAMSAYLR YIVQRADSSF LYDKYQNQSI
AAHVMRALAA EQSEVSPEQR RAICEAFESA NNTHGLNLTA HKYPGLRGTL QTASTDCDTI
VEAAALLPAF DQAVEGNRHQ DDYGSGLGMA EEKFHYYLDL NDRYVYFYEP VNVEYFAMNN
WSFLQSGSIG IDRKDIEKVF TGRTVLSSIY QDQRTKQNVM SLLTPVYVAG QLKGIVLLDI
NKNNLRNIFY THDRPLLWRF LNVTLTDTDS GRDIIINQSE DNLFQYVSYV HDLPGGIRVS
LSIDILYFIT SSWKSVLFWI LTALILLNMV RMHFRLYQNV SRENISDAMT GLYNRKILTP
ELEQRLQKLV QSGSSVMFIA IDMDKLKQIN DTLGHQEGDL AITLLAQAIK QSIRKSDYAI
RLGGDEFCII LVDSTPQIAA QLPERIEKRL QHIAPQKEIG FSSGIYAMKE NDTLHDAYKA
SDERLYVNKQ NKNSRS
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