| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1397 |
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| Symbol | |
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| ID | 6142933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 1381570 |
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| End bp | 1382595 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641616275 |
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| Product | GAF domain/diguanylate cyclase domain-containing protein |
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| Protein accession | YP_001743455 |
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| Protein GI | 170679654 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.210623 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCAGATC AGATTATCGC CCGCGTCTCG CAATCCCTTG CCAAAGAACA GTCACTGGAA
AGCCTGGTCC GACAGCTTCT GGAGATGCTG GAAATGGTCA CTGATATGGA ATCAACCTAC
CTGACCAAAG TGGATGTCGA AGCGCGCCTG CAGCATATAA TGTTTGCCCG TAACAGCCAG
AAAATGCACA TCCCGGAGAA TTTTACCGTC TCGTGGGATT ATTCGTTATG CAAACGCGCC
ATTGATGAAA ACTGCTTTTT CAGCGATGAA GTCCCCGACC GTTGGGGCGA CTGTATTGCG
GCACGCAATC TTGGCATCAC CACATTTCTG AGCACGCCAA TTCACTTACC GGATGGATCA
TTCTATGGCA CGCTTTGCGC CGCCAGCAGT GAGAAGCGCC AGTGGAGTGA ACGCGCGGAA
CAGGTTTTGC AGTTATTCGC CGGACTGATT GCACAATATA TTCAAAAAGA GGCGCTGGTA
GAACAGCTGC GCGAAGCCAA TGCCGCACTG ATAGCGCAAT CGTATACCGA CTCGTTAACC
GGGCTACCGA ATCGGCGGGC GATTTTTGAA AATCTGACGA CGCTGTTTTC TCTCGCCCGG
CATCTTAACC ATAAGATAAT GATCGCGTTT ATCGACCTGG ATAACTTCAA ATTAATCAAC
GATCGTTTTG GTCATAATAG TGGCGATCTG TTTCTCATTC AGGTTGGCGA GCGCCTTAAT
ACGCTCCAGC AAAATGGCGA AGTTATTGGT CGTCTCGGCG GTGATGAGTT TTTGGTTGTT
TCACTGAACA ACGAGAATAC GGATATTTCG TCGCTGCGAG AACGTATTCA ACAGCAAATA
CGTGGAGAAT ATCACTTAGG TGATGTTGAT TTGTATTATC CCGGTGCCAG TCTTGGCATA
GTAGAAGTCG ATCCTGAAAC GACCGATGCA GACAGTGCCC TGCATGCTGC CGATATCGCG
ATGTATCAGG AGAAAAAACA CAAACAGAAA ACACCTTTTG TCGCGCATCC AGCGCTACAT
TCCTGA
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| Protein sequence | MSDQIIARVS QSLAKEQSLE SLVRQLLEML EMVTDMESTY LTKVDVEARL QHIMFARNSQ
KMHIPENFTV SWDYSLCKRA IDENCFFSDE VPDRWGDCIA ARNLGITTFL STPIHLPDGS
FYGTLCAASS EKRQWSERAE QVLQLFAGLI AQYIQKEALV EQLREANAAL IAQSYTDSLT
GLPNRRAIFE NLTTLFSLAR HLNHKIMIAF IDLDNFKLIN DRFGHNSGDL FLIQVGERLN
TLQQNGEVIG RLGGDEFLVV SLNNENTDIS SLRERIQQQI RGEYHLGDVD LYYPGASLGI
VEVDPETTDA DSALHAADIA MYQEKKHKQK TPFVAHPALH S
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