Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_1389 |
Symbol | |
ID | 6143821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 1378501 |
End bp | 1379424 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641616267 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001743447 |
Protein GI | 170681592 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.393156 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 0.955383 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATAATT TACCGCTGCT GAACGATTTG CGCGTCTTTA TGCTGGTGGC TCGCCGGGCT GGTTTTGCCG CCGTGGCAGA AGAATTGGGC GTTTCTCCGG CGTTCGTCAG CAAGCGCATC GCCTTGCTGG AGCAAACGCT AAACGTGGTG TTGTTACACC GCACCACCCG CCGCGTCACC ATTACCGAAG AAGGAGAGCG GATTTATGAA TGGGCGCAGC GGATTTTGCA GGATGTCGGT CAGATGATGG ACGAACTTTC TGACGTGCGT CAGGTGCCAC AGGGGATGCT GCGTATTATC AGCAGCTTTG GTTTTGGACG ACAGGTGGTG GCTCCGGCGT TATCAGCGCT GGCGAAGGCG TATCCGCAAC TGGAATTACG TTTTGATGTG GAAGACCGGT TGGTCGATTT GGTCAATGAA GGTGTCGATC TCGATATTCG CATTGGCGAT GATATCGCCC CTAATTTAAT CGCCCGCAAA CTGGCGACCA ATTATCGCAT TCTCTGCGCG TCACCGGAAT TTATTGCGCA ACATGGCGCG CCGAAACATT TAACCGATCT TTCTGCATTG CCGTGCCTGG TCATTAAAGA GCGCGATCAT CCTTTTGGTG TCTGGCAATT ACGCAATAAA GAAGGCCACC ATGCGATTAA AGTTACCGGC CCACTGTCGT CTAATCATGG AGAAATTGTC CATCAGTGGT GTCTCGATGG GCAGGGGATT GCTCTGCGCT CCTGGTGGGA TGTTAGCGAA AACATTGCCA GTGGTCATTT AGTGCAAGTG CTACCGGAAT ATTACCAGCC AGCGAACGTC TGGGCCGTTT ATGTTTCAAG GCTGGCGACG TCAGCGAAAG TGCGGATAAC GGTAGAATTT TTACGCCAGT ATTTTGCCGA GCACTACCCG AATTTTTCAC TGGAGCATGC CTGA
|
Protein sequence | MNNLPLLNDL RVFMLVARRA GFAAVAEELG VSPAFVSKRI ALLEQTLNVV LLHRTTRRVT ITEEGERIYE WAQRILQDVG QMMDELSDVR QVPQGMLRII SSFGFGRQVV APALSALAKA YPQLELRFDV EDRLVDLVNE GVDLDIRIGD DIAPNLIARK LATNYRILCA SPEFIAQHGA PKHLTDLSAL PCLVIKERDH PFGVWQLRNK EGHHAIKVTG PLSSNHGEIV HQWCLDGQGI ALRSWWDVSE NIASGHLVQV LPEYYQPANV WAVYVSRLAT SAKVRITVEF LRQYFAEHYP NFSLEHA
|
| |