Gene EcSMS35_1389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1389 
Symbol 
ID6143821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1378501 
End bp1379424 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content52% 
IMG OID641616267 
ProductLysR family transcriptional regulator 
Protein accessionYP_001743447 
Protein GI170681592 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.393156 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.955383 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAATT TACCGCTGCT GAACGATTTG CGCGTCTTTA TGCTGGTGGC TCGCCGGGCT 
GGTTTTGCCG CCGTGGCAGA AGAATTGGGC GTTTCTCCGG CGTTCGTCAG CAAGCGCATC
GCCTTGCTGG AGCAAACGCT AAACGTGGTG TTGTTACACC GCACCACCCG CCGCGTCACC
ATTACCGAAG AAGGAGAGCG GATTTATGAA TGGGCGCAGC GGATTTTGCA GGATGTCGGT
CAGATGATGG ACGAACTTTC TGACGTGCGT CAGGTGCCAC AGGGGATGCT GCGTATTATC
AGCAGCTTTG GTTTTGGACG ACAGGTGGTG GCTCCGGCGT TATCAGCGCT GGCGAAGGCG
TATCCGCAAC TGGAATTACG TTTTGATGTG GAAGACCGGT TGGTCGATTT GGTCAATGAA
GGTGTCGATC TCGATATTCG CATTGGCGAT GATATCGCCC CTAATTTAAT CGCCCGCAAA
CTGGCGACCA ATTATCGCAT TCTCTGCGCG TCACCGGAAT TTATTGCGCA ACATGGCGCG
CCGAAACATT TAACCGATCT TTCTGCATTG CCGTGCCTGG TCATTAAAGA GCGCGATCAT
CCTTTTGGTG TCTGGCAATT ACGCAATAAA GAAGGCCACC ATGCGATTAA AGTTACCGGC
CCACTGTCGT CTAATCATGG AGAAATTGTC CATCAGTGGT GTCTCGATGG GCAGGGGATT
GCTCTGCGCT CCTGGTGGGA TGTTAGCGAA AACATTGCCA GTGGTCATTT AGTGCAAGTG
CTACCGGAAT ATTACCAGCC AGCGAACGTC TGGGCCGTTT ATGTTTCAAG GCTGGCGACG
TCAGCGAAAG TGCGGATAAC GGTAGAATTT TTACGCCAGT ATTTTGCCGA GCACTACCCG
AATTTTTCAC TGGAGCATGC CTGA
 
Protein sequence
MNNLPLLNDL RVFMLVARRA GFAAVAEELG VSPAFVSKRI ALLEQTLNVV LLHRTTRRVT 
ITEEGERIYE WAQRILQDVG QMMDELSDVR QVPQGMLRII SSFGFGRQVV APALSALAKA
YPQLELRFDV EDRLVDLVNE GVDLDIRIGD DIAPNLIARK LATNYRILCA SPEFIAQHGA
PKHLTDLSAL PCLVIKERDH PFGVWQLRNK EGHHAIKVTG PLSSNHGEIV HQWCLDGQGI
ALRSWWDVSE NIASGHLVQV LPEYYQPANV WAVYVSRLAT SAKVRITVEF LRQYFAEHYP
NFSLEHA