Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_1376 |
Symbol | pabB |
ID | 6144488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 1363927 |
End bp | 1365288 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641616254 |
Product | aminodeoxychorismate synthase |
Protein accession | YP_001743434 |
Protein GI | 170679636 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0147] Anthranilate/para-aminobenzoate synthases component I |
TIGRFAM ID | [TIGR00553] aminodeoxychorismate synthase, component I, bacterial clade |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.661176 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.079748 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGACGT TATCTCCCGC TGTGATTACT TTACCCTGGC GTCAGGACGC CGCTGAATTT TATTTCTCAC GCTTAAGCCA CCTGCCGTGG GCGATGCTTT TACACTCCGG CTATGCCGAT CATCCGTATA GCCGCTTTGA TATTGTGGTC GCCGAGCCAA TTTGCACTTT AACTACTTTC GGTAAAGAAA CCGTTATTAG TGAAAGCGAT AAACGTACAA CGACCACTGA TGACCCGCTA CAGGTGCTCC AGCAGGTGCT GGATCGCGCA GACATTCACC CAACGCATAA CGAAGATTTG CCATTTCAGG GCGGCGCGCT GGGGTTGTTT GGCTACGATC TGGGCCGCCG TTTTGAGTCA CTGCCAGAAA TTGCGCAGCA AGATATCGTT CTGCCGGATA TGGCAGTGGG TATCTACGAC TGGGCGCTGG TTGTTGACCA CCAGCGTCAA ACAGTTTCTT TGCTGAGTCA TAATGATGTC AATGCTCGTC GGGCCTGGCT GGAAAGCCAG CAATTCTCGC CGCAGGAAGA TTTCACGCTC ACTTCCGACT GGCAATCCAA TATGACCCGC GAACTGTACG GCGAAAAATT TCGCCAGGTA CAGGAATATC TGCACAGCGG TGATTGCTAT CAGGTGAATC TCGCCCAGCG TTTTCATGCG ACCTATTCTG GCGATGAATG GCAGGCATTC CTTCAGCTTA ATCAGGCCAA CCGCGCGCCG TTTAGCGCTT TTTTACGCCT TGAACAAGGC ACGATTTTAA GCCTTTCGCC AGAGCGGTTT ATCCTTTGTG ATAACAGTGA AATCCAGACC CGCCCGATTA AAGGCACGCT ACCACGCCTG CCCGATCCTC AGGAAGATAG CAAACAAGCA GAGAAACTGG CGAACTCAGC GAAAGATCGT GCCGAAAATC TGATGATTGT CGATTTAATG CGTAATGATA TCGGTCGTGT TGCCGTAGCA GGTTCGGTAA AAGTACCAGA GCTGTTCGTG GTGGAACCCT TCCCTGCCGT GCATCATCTG GTCAGCACCA TAACGGCGCA ACTACCAGAA CAGTTACACG CCAGCGATCT GCTGCGCGCG GCTTTTCCTG GTGGCTCAAT AACTGGGGCT CCGAAAGTAC GGGCTATGGA AATTATCGAC GAACTGGAAC CGCAGCGACG CAATGCCTGG TGCGGCAGCA TTGGCTATTT GAGCTTTTGC GGCAACATGG ACACCAGCAT TACTATCCGC ACGCTGACTG CCATTAACGG ACAAATTTAC TGCTCTGCGG GGGGTGGAAT TGTCGCCGAT AGCCAGGAAG AAGCGGAATA TCAGGAAACT TTTGATAAAG TTAATAAGAT ATTACGCCAA CTGGAGAAGT AA
|
Protein sequence | MKTLSPAVIT LPWRQDAAEF YFSRLSHLPW AMLLHSGYAD HPYSRFDIVV AEPICTLTTF GKETVISESD KRTTTTDDPL QVLQQVLDRA DIHPTHNEDL PFQGGALGLF GYDLGRRFES LPEIAQQDIV LPDMAVGIYD WALVVDHQRQ TVSLLSHNDV NARRAWLESQ QFSPQEDFTL TSDWQSNMTR ELYGEKFRQV QEYLHSGDCY QVNLAQRFHA TYSGDEWQAF LQLNQANRAP FSAFLRLEQG TILSLSPERF ILCDNSEIQT RPIKGTLPRL PDPQEDSKQA EKLANSAKDR AENLMIVDLM RNDIGRVAVA GSVKVPELFV VEPFPAVHHL VSTITAQLPE QLHASDLLRA AFPGGSITGA PKVRAMEIID ELEPQRRNAW CGSIGYLSFC GNMDTSITIR TLTAINGQIY CSAGGGIVAD SQEEAEYQET FDKVNKILRQ LEK
|
| |