Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_1369 |
Symbol | manZ |
ID | 6147053 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 1355347 |
End bp | 1356198 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641616247 |
Product | PTS system mannose-specific transporter subunit IID |
Protein accession | YP_001743427 |
Protein GI | 170680039 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3716] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID |
TIGRFAM ID | [TIGR00828] PTS system, mannose/fructose/sorbose family, IID component |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0151358 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.0150723 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTGATA CAACTCAAAC TACCACCGAG AAAAAACTCA CTCAAAGTGA TATTCGTGGC GTCTTCCTGC GTTCTAACCT CTTCCAGGGT TCATGGAACT TCGAACGTAT GCAGGCACTG GGTTTCTGCT TCTCTATGGT ACCGGCAATT CGTCGACTCT ACCCTGAGAA CAACGAAGCT CGTAAACAAG CTATTCGCCG TCACCTGGAG TTCTTCAACA CCCAGCCGTT CGTGGCTGCG CCGATTCTCG GCGTAACCCT GGCGCTGGAA GAACAGCGTG CTAATGGCGC AGAGATCGAT GACGGTGCTA TCAACGGTAT CAAAGTCGGT TTGATGGGGC CGCTGGCTGG TGTAGGCGAC CCGATCTTCT GGGGAACCGT ACGTCCGGTA TTTGCAGCGC TGGGTGCCGG TATCGCAATG AGCGGCAGCC TGTTAGGTCC GCTGCTGTTC TTCATCTTGT TTAACCTGGT GCGCCTGGCA ACCCGTTACT ACGGCGTAGC GTATGGTTAC TCCAAAGGTA TCGATATCGT TAAAGATATG GGTGGTGGCT TCCTGCAAAA ACTGACGGAA GGGGCGTCTA TCCTCGGCCT GTTTGTCATG GGGGCATTAG TTAACAAGTG GACGCATGTC AACATCCCGC TGGTTGTCTC TCGCATTACT GACCAGACGG GCAAAGAACA CGTTACCACT GTCCAGACTA TTCTGGACCA GTTAATGCCA GGCCTGGTAC CACTGCTGCT GACCTTTGCT TGTATGTGGC TACTGCGCAA AAAAGTTAAC CCGCTGTGGA TCATCGTTGG CTTCTTCGTT ATCGGTATCG CTGGTTACGC TTGCGGCCTG CTGGGACTGT AA
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Protein sequence | MVDTTQTTTE KKLTQSDIRG VFLRSNLFQG SWNFERMQAL GFCFSMVPAI RRLYPENNEA RKQAIRRHLE FFNTQPFVAA PILGVTLALE EQRANGAEID DGAINGIKVG LMGPLAGVGD PIFWGTVRPV FAALGAGIAM SGSLLGPLLF FILFNLVRLA TRYYGVAYGY SKGIDIVKDM GGGFLQKLTE GASILGLFVM GALVNKWTHV NIPLVVSRIT DQTGKEHVTT VQTILDQLMP GLVPLLLTFA CMWLLRKKVN PLWIIVGFFV IGIAGYACGL LGL
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