| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1367 |
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| Symbol | rrmA |
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| ID | 6147110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1353033 |
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| End bp | 1353842 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641616244 |
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| Product | 23S rRNA methyltransferase A |
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| Protein accession | YP_001743424 |
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| Protein GI | 170683757 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000667026 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.0197956 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGTTTT CCTGTCCACT TTGCCATCAG CCTCTTTCGC GTGAAAAAAA CAGCTATATC
TGTCCCCAGC GACATCAGTT TGATATGGCG AAAGAAGGGT ATGTCAATCT GCTGCCCGTT
CAGCATAAAC GGTCTCGTGA TCCGGGCGAC AGCGCGGAAA TGATGCAAGC ACGCCGCGCA
TTCTTAGATG CCGGACATTA TCAGCCGCTG CGTGATGCAA TTGTCGCCCA ACTGCGGGAA
CGGCTTGATG AAAAGGCCAC GGCGGTGCTG GATATTGGCT GTGGTGAAGG GTATTACACA
CACGCATTTG CCGATGCGCT GCCCGAAATC ACCACGTTTG GTCTGGATGT CTCGAAGGTA
GCGATAAAAG CGGCGGCGAA ACGCTATCCG CAGGTCACTT TTTGTGTTGC TTCCAGCCAC
CGTTTGCCGT TTTCCGATAC CAGTATGGAC GCCATAATAC GTATTTACGC GCCGTGTAAA
GCAGAAGAAT TAGCGCGAGT AGTGAAGCCT GGCGGTTGGG TCATTACTGC CACGCCGGGA
CCGCGACATT TGATGGAGCT GAAGGGGCTG ATTTACAATG AAGTACATCT TCATGCACCA
CATGCAGAAC AACTGGAAGG TTTTACATTA CAGCAGAGTG ATGAGTTGTG TTATCCGATG
CGTCTTCGCG GTGACGAAGC CGTCGCATTA TTGCAGATGA CGCCGTTTGC CTGGCGTGCG
AAGTCAGAAG TCTGGCAAAC ACTGGCCGCA AAAGAAGTGT TCGACTGCCA GACGGACTTT
AATATTCACC TCTGGCAGCG TTCTTATTAA
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| Protein sequence | MSFSCPLCHQ PLSREKNSYI CPQRHQFDMA KEGYVNLLPV QHKRSRDPGD SAEMMQARRA
FLDAGHYQPL RDAIVAQLRE RLDEKATAVL DIGCGEGYYT HAFADALPEI TTFGLDVSKV
AIKAAAKRYP QVTFCVASSH RLPFSDTSMD AIIRIYAPCK AEELARVVKP GGWVITATPG
PRHLMELKGL IYNEVHLHAP HAEQLEGFTL QQSDELCYPM RLRGDEAVAL LQMTPFAWRA
KSEVWQTLAA KEVFDCQTDF NIHLWQRSY
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