Gene EcSMS35_1366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1366 
Symbol 
ID6143049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1353839 
End bp1354405 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content51% 
IMG OID641616245 
Producthypothetical protein 
Protein accessionYP_001743425 
Protein GI170683257 
COG category[S] Function unknown 
COG ID[COG1971] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000222622 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.0184788 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATCA CTGCTACTGT TCTTCTTGCG TTTGGTATGT CGATGGATGC ATTTGCTGCA 
TCAATCGGTA AAGGTGCCAC CCTCCATAAA CCGAAATTTT CTGAAGCGTT GCGAACCGGC
CTTATTTTTG GTGCCGTCGA AACCCTGACG CCGCTGATCG GCTGGGGAAT GGGCATGTTA
GCCAGCCGGT TTGTCCTTGA ATGGAACCAC TGGATTGCGT TTGTGCTGCT GATATTCCTC
GGCGGGCGAA TGATTATTGA GGGTTTTCGT GGCGCAGATG ATGAAGATGA AGAACCGCGC
CGTCGACACG GTTTCTGGCT ACTGGTAACC ACCGCGATTG CCACCAGCCT GGATGCCATG
GCTGTGGGTG TTGGTCTTGC TTTCCTGCAG GTTAACATTA TCGCGACCGC ATTGGCCATT
GGTTGTGCAA CCTTGATTAT GTCGACATTA GGGATGATGG TTGGTCGCTT TATCGGCTCA
ATTATTGGGA AAAAAGCGGA AATTCTCGGC GGGCTGGTGC TGATCGGTAT TGGCGTCCAG
ATCCTCTGGA CGCACTTCCA CGGTTAA
 
Protein sequence
MNITATVLLA FGMSMDAFAA SIGKGATLHK PKFSEALRTG LIFGAVETLT PLIGWGMGML 
ASRFVLEWNH WIAFVLLIFL GGRMIIEGFR GADDEDEEPR RRHGFWLLVT TAIATSLDAM
AVGVGLAFLQ VNIIATALAI GCATLIMSTL GMMVGRFIGS IIGKKAEILG GLVLIGIGVQ
ILWTHFHG